Gene : FIP1 A. thaliana TAIR10
Primary Identifier:  ? AT1G28200 Defline:  (1 of 3) PTHR31969:SF4 - GEM-LIKE PROTEIN 1-RELATED
Genomic Order:  2798 Name:  ? AT1G28200
Secondary Identifier:  ? PAC:19649397
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G28200 0.5kb upstream 0.5kb upstream 2720 true Chr1: 9850147-9852866 Arabidopsis thaliana
AT1G28200 0.5kb upstream 0.5kb upstream 500 false Chr1: 9852367-9852866 Arabidopsis thaliana
AT1G28200 0.5kb downstream 0.5kb downstream 2720 true Chr1: 9849647-9852366 Arabidopsis thaliana
AT1G28200 0.5kb downstream 0.5kb downstream 500 false Chr1: 9849647-9850146 Arabidopsis thaliana
AT1G28200 1.0kb upstream 1.0kb upstream 3220 true Chr1: 9850147-9853366 Arabidopsis thaliana
AT1G28200 1.0kb upstream 1.0kb upstream 1000 false Chr1: 9852367-9853366 Arabidopsis thaliana
AT1G28200 1.0kb downstream 1.0kb downstream 3220 true Chr1: 9849147-9852366 Arabidopsis thaliana
AT1G28200 1.0kb downstream 1.0kb downstream 1000 false Chr1: 9849147-9850146 Arabidopsis thaliana
AT1G28200 2.0kb upstream 2.0kb upstream 4220 true Chr1: 9850147-9854366 Arabidopsis thaliana
AT1G28200 2.0kb upstream 2.0kb upstream 2000 false Chr1: 9852367-9854366 Arabidopsis thaliana
AT1G28200 2.0kb downstream 2.0kb downstream 4220 true Chr1: 9848147-9852366 Arabidopsis thaliana
AT1G28200 2.0kb downstream 2.0kb downstream 2000 false Chr1: 9848147-9850146 Arabidopsis thaliana
AT1G28200 5.0kb upstream 5.0kb upstream 7220 true Chr1: 9850147-9857366 Arabidopsis thaliana
AT1G28200 5.0kb upstream 5.0kb upstream 5000 false Chr1: 9852367-9857366 Arabidopsis thaliana
AT1G28200 5.0kb downstream 5.0kb downstream 7220 true Chr1: 9845147-9852366 Arabidopsis thaliana
AT1G28200 5.0kb downstream 5.0kb downstream 5000 false Chr1: 9845147-9850146 Arabidopsis thaliana
AT1G28200 10.0kb upstream 10.0kb upstream 12220 true Chr1: 9850147-9862366 Arabidopsis thaliana
AT1G28200 10.0kb upstream 10.0kb upstream 10000 false Chr1: 9852367-9862366 Arabidopsis thaliana
AT1G28200 10.0kb downstream 10.0kb downstream 12220 true Chr1: 9840147-9852366 Arabidopsis thaliana
AT1G28200 10.0kb downstream 10.0kb downstream 10000 false Chr1: 9840147-9850146 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360481 5261 Brassicaceae View MSA
123834436 5264 Brassicales-Malvales View MSA
124344239 5266 SBM View MSA
124252953 5268 Malvidae View MSA
124073004 5270 Rosid View MSA
123738437 5271 Pentapetalae View MSA
122790242 5272 Eudicot View MSA
122050342 5273 Angiosperm View MSA
121350470 5274 Embryophyte View MSA
123381748 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.024       Low
cufflinks 22.617        
cufflinks 12.073        
cufflinks 21.51        
cufflinks 13.311        
cufflinks 25.145       High

0 Strain