Gene : AT1G28120 A. thaliana TAIR10
Defline:  (1 of 1) PTHR12931 - UBIQUITIN THIOLESTERASE PROTEIN OTUB Genomic Order:  2789
Name:  ? AT1G28120 Secondary Identifier:  ? PAC:19651585
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G28120 0.5kb upstream 0.5kb upstream 3086 true Chr1: 9812959-9816044 Arabidopsis thaliana
AT1G28120 0.5kb upstream 0.5kb upstream 500 false Chr1: 9815545-9816044 Arabidopsis thaliana
AT1G28120 0.5kb downstream 0.5kb downstream 3086 true Chr1: 9812459-9815544 Arabidopsis thaliana
AT1G28120 0.5kb downstream 0.5kb downstream 500 false Chr1: 9812459-9812958 Arabidopsis thaliana
AT1G28120 1.0kb upstream 1.0kb upstream 3586 true Chr1: 9812959-9816544 Arabidopsis thaliana
AT1G28120 1.0kb upstream 1.0kb upstream 1000 false Chr1: 9815545-9816544 Arabidopsis thaliana
AT1G28120 1.0kb downstream 1.0kb downstream 3586 true Chr1: 9811959-9815544 Arabidopsis thaliana
AT1G28120 1.0kb downstream 1.0kb downstream 1000 false Chr1: 9811959-9812958 Arabidopsis thaliana
AT1G28120 2.0kb upstream 2.0kb upstream 4586 true Chr1: 9812959-9817544 Arabidopsis thaliana
AT1G28120 2.0kb upstream 2.0kb upstream 2000 false Chr1: 9815545-9817544 Arabidopsis thaliana
AT1G28120 2.0kb downstream 2.0kb downstream 4586 true Chr1: 9810959-9815544 Arabidopsis thaliana
AT1G28120 2.0kb downstream 2.0kb downstream 2000 false Chr1: 9810959-9812958 Arabidopsis thaliana
AT1G28120 5.0kb upstream 5.0kb upstream 7586 true Chr1: 9812959-9820544 Arabidopsis thaliana
AT1G28120 5.0kb upstream 5.0kb upstream 5000 false Chr1: 9815545-9820544 Arabidopsis thaliana
AT1G28120 5.0kb downstream 5.0kb downstream 7586 true Chr1: 9807959-9815544 Arabidopsis thaliana
AT1G28120 5.0kb downstream 5.0kb downstream 5000 false Chr1: 9807959-9812958 Arabidopsis thaliana
AT1G28120 10.0kb upstream 10.0kb upstream 12586 true Chr1: 9812959-9825544 Arabidopsis thaliana
AT1G28120 10.0kb upstream 10.0kb upstream 10000 false Chr1: 9815545-9825544 Arabidopsis thaliana
AT1G28120 10.0kb downstream 10.0kb downstream 12586 true Chr1: 9802959-9815544 Arabidopsis thaliana
AT1G28120 10.0kb downstream 10.0kb downstream 10000 false Chr1: 9802959-9812958 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363464 5261 Brassicaceae View MSA
123831879 5264 Brassicales-Malvales View MSA
124340102 5266 SBM View MSA
124243914 5268 Malvidae View MSA
124065600 5270 Rosid View MSA
123752549 5271 Pentapetalae View MSA
122787068 5272 Eudicot View MSA
122043006 5273 Angiosperm View MSA
121344850 5274 Embryophyte View MSA
123424451 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.536       Low
cufflinks 19.84       High
cufflinks 17.259        
cufflinks 18.885        
cufflinks 17.305        
cufflinks 18.853        

0 Strain