Gene : GUT2 A. thaliana TAIR10
Primary Identifier:  ? AT1G27440 Defline:  (1 of 1) PTHR11062//PTHR11062:SF105 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED // BETA-1,4-XYLOSYLTRANSFERASE IRX10-RELATED
Genomic Order:  2721 Name:  ? AT1G27440
Secondary Identifier:  ? PAC:19657644
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5980 Arabidopsis thaliana pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G27440 0.5kb upstream 0.5kb upstream 2735 true Chr1: 9529141-9531875 Arabidopsis thaliana
AT1G27440 0.5kb upstream 0.5kb upstream 500 false Chr1: 9531376-9531875 Arabidopsis thaliana
AT1G27440 0.5kb downstream 0.5kb downstream 2735 true Chr1: 9528641-9531375 Arabidopsis thaliana
AT1G27440 0.5kb downstream 0.5kb downstream 500 false Chr1: 9528641-9529140 Arabidopsis thaliana
AT1G27440 1.0kb upstream 1.0kb upstream 3235 true Chr1: 9529141-9532375 Arabidopsis thaliana
AT1G27440 1.0kb upstream 1.0kb upstream 1000 false Chr1: 9531376-9532375 Arabidopsis thaliana
AT1G27440 1.0kb downstream 1.0kb downstream 3235 true Chr1: 9528141-9531375 Arabidopsis thaliana
AT1G27440 1.0kb downstream 1.0kb downstream 1000 false Chr1: 9528141-9529140 Arabidopsis thaliana
AT1G27440 2.0kb upstream 2.0kb upstream 4235 true Chr1: 9529141-9533375 Arabidopsis thaliana
AT1G27440 2.0kb upstream 2.0kb upstream 2000 false Chr1: 9531376-9533375 Arabidopsis thaliana
AT1G27440 2.0kb downstream 2.0kb downstream 4235 true Chr1: 9527141-9531375 Arabidopsis thaliana
AT1G27440 2.0kb downstream 2.0kb downstream 2000 false Chr1: 9527141-9529140 Arabidopsis thaliana
AT1G27440 5.0kb upstream 5.0kb upstream 7235 true Chr1: 9529141-9536375 Arabidopsis thaliana
AT1G27440 5.0kb upstream 5.0kb upstream 5000 false Chr1: 9531376-9536375 Arabidopsis thaliana
AT1G27440 5.0kb downstream 5.0kb downstream 7235 true Chr1: 9524141-9531375 Arabidopsis thaliana
AT1G27440 5.0kb downstream 5.0kb downstream 5000 false Chr1: 9524141-9529140 Arabidopsis thaliana
AT1G27440 10.0kb upstream 10.0kb upstream 12235 true Chr1: 9529141-9541375 Arabidopsis thaliana
AT1G27440 10.0kb upstream 10.0kb upstream 10000 false Chr1: 9531376-9541375 Arabidopsis thaliana
AT1G27440 10.0kb downstream 10.0kb downstream 12235 true Chr1: 9519141-9531375 Arabidopsis thaliana
AT1G27440 10.0kb downstream 10.0kb downstream 10000 false Chr1: 9519141-9529140 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377800 5261 Brassicaceae View MSA
123828573 5264 Brassicales-Malvales View MSA
124337730 5266 SBM View MSA
124244464 5268 Malvidae View MSA
124072304 5270 Rosid View MSA
123741163 5271 Pentapetalae View MSA
122792713 5272 Eudicot View MSA
122045479 5273 Angiosperm View MSA
121345748 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.254        
cufflinks 7.144        
cufflinks 2.691        
cufflinks 9.69        
cufflinks 2.751        
cufflinks 11.806       High

0 Strain