Gene : AT1G26890 A. thaliana TAIR10
Defline:  (1 of 44) PTHR32212//PTHR32212:SF112 - FAMILY NOT NAMED // FBD / LEUCINE RICH REPEAT DOMAINS CONTAINING PROTEIN-RELATED Genomic Order:  2661
Name:  ? AT1G26890 Secondary Identifier:  ? PAC:19657647
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G26890 0.5kb upstream 0.5kb upstream 2158 true Chr1: 9317089-9319246 Arabidopsis thaliana
AT1G26890 0.5kb upstream 0.5kb upstream 500 false Chr1: 9317089-9317588 Arabidopsis thaliana
AT1G26890 0.5kb downstream 0.5kb downstream 2158 true Chr1: 9317589-9319746 Arabidopsis thaliana
AT1G26890 0.5kb downstream 0.5kb downstream 500 false Chr1: 9319247-9319746 Arabidopsis thaliana
AT1G26890 1.0kb upstream 1.0kb upstream 2658 true Chr1: 9316589-9319246 Arabidopsis thaliana
AT1G26890 1.0kb upstream 1.0kb upstream 1000 false Chr1: 9316589-9317588 Arabidopsis thaliana
AT1G26890 1.0kb downstream 1.0kb downstream 2658 true Chr1: 9317589-9320246 Arabidopsis thaliana
AT1G26890 1.0kb downstream 1.0kb downstream 1000 false Chr1: 9319247-9320246 Arabidopsis thaliana
AT1G26890 2.0kb upstream 2.0kb upstream 3658 true Chr1: 9315589-9319246 Arabidopsis thaliana
AT1G26890 2.0kb upstream 2.0kb upstream 2000 false Chr1: 9315589-9317588 Arabidopsis thaliana
AT1G26890 2.0kb downstream 2.0kb downstream 3658 true Chr1: 9317589-9321246 Arabidopsis thaliana
AT1G26890 2.0kb downstream 2.0kb downstream 2000 false Chr1: 9319247-9321246 Arabidopsis thaliana
AT1G26890 5.0kb upstream 5.0kb upstream 6658 true Chr1: 9312589-9319246 Arabidopsis thaliana
AT1G26890 5.0kb upstream 5.0kb upstream 5000 false Chr1: 9312589-9317588 Arabidopsis thaliana
AT1G26890 5.0kb downstream 5.0kb downstream 6658 true Chr1: 9317589-9324246 Arabidopsis thaliana
AT1G26890 5.0kb downstream 5.0kb downstream 5000 false Chr1: 9319247-9324246 Arabidopsis thaliana
AT1G26890 10.0kb upstream 10.0kb upstream 11658 true Chr1: 9307589-9319246 Arabidopsis thaliana
AT1G26890 10.0kb upstream 10.0kb upstream 10000 false Chr1: 9307589-9317588 Arabidopsis thaliana
AT1G26890 10.0kb downstream 10.0kb downstream 11658 true Chr1: 9317589-9329246 Arabidopsis thaliana
AT1G26890 10.0kb downstream 10.0kb downstream 10000 false Chr1: 9319247-9329246 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381753 5261 Brassicaceae View MSA
123803421 5264 Brassicales-Malvales View MSA
124300533 5266 SBM View MSA
124151699 5268 Malvidae View MSA
124073024 5270 Rosid View MSA
123753592 5271 Pentapetalae View MSA
122797964 5272 Eudicot View MSA
122050940 5273 Angiosperm View MSA
121351679 5274 Embryophyte View MSA
123382274 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.036     Low Low
cufflinks 0.577       High
cufflinks 0.059     Low  
cufflinks 0.357     Low  
cufflinks 0.049     Low  
cufflinks 0.463        

0 Strain