Gene : AT1G26380 A. thaliana TAIR10
Defline:  (1 of 9) PTHR32448//PTHR32448:SF30 - FAMILY NOT NAMED // BERBERINE BRIDGE ENZYME-LIKE PROTEIN-RELATED Genomic Order:  2601
Name:  ? AT1G26380 Secondary Identifier:  ? PAC:19649211
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G26380 0.5kb upstream 0.5kb upstream 2292 true Chr1: 9126737-9129028 Arabidopsis thaliana
AT1G26380 0.5kb upstream 0.5kb upstream 500 false Chr1: 9128529-9129028 Arabidopsis thaliana
AT1G26380 0.5kb downstream 0.5kb downstream 2292 true Chr1: 9126237-9128528 Arabidopsis thaliana
AT1G26380 0.5kb downstream 0.5kb downstream 500 false Chr1: 9126237-9126736 Arabidopsis thaliana
AT1G26380 1.0kb upstream 1.0kb upstream 2792 true Chr1: 9126737-9129528 Arabidopsis thaliana
AT1G26380 1.0kb upstream 1.0kb upstream 1000 false Chr1: 9128529-9129528 Arabidopsis thaliana
AT1G26380 1.0kb downstream 1.0kb downstream 2792 true Chr1: 9125737-9128528 Arabidopsis thaliana
AT1G26380 1.0kb downstream 1.0kb downstream 1000 false Chr1: 9125737-9126736 Arabidopsis thaliana
AT1G26380 2.0kb upstream 2.0kb upstream 3792 true Chr1: 9126737-9130528 Arabidopsis thaliana
AT1G26380 2.0kb upstream 2.0kb upstream 2000 false Chr1: 9128529-9130528 Arabidopsis thaliana
AT1G26380 2.0kb downstream 2.0kb downstream 3792 true Chr1: 9124737-9128528 Arabidopsis thaliana
AT1G26380 2.0kb downstream 2.0kb downstream 2000 false Chr1: 9124737-9126736 Arabidopsis thaliana
AT1G26380 5.0kb upstream 5.0kb upstream 6792 true Chr1: 9126737-9133528 Arabidopsis thaliana
AT1G26380 5.0kb upstream 5.0kb upstream 5000 false Chr1: 9128529-9133528 Arabidopsis thaliana
AT1G26380 5.0kb downstream 5.0kb downstream 6792 true Chr1: 9121737-9128528 Arabidopsis thaliana
AT1G26380 5.0kb downstream 5.0kb downstream 5000 false Chr1: 9121737-9126736 Arabidopsis thaliana
AT1G26380 10.0kb upstream 10.0kb upstream 11792 true Chr1: 9126737-9138528 Arabidopsis thaliana
AT1G26380 10.0kb upstream 10.0kb upstream 10000 false Chr1: 9128529-9138528 Arabidopsis thaliana
AT1G26380 10.0kb downstream 10.0kb downstream 11792 true Chr1: 9116737-9128528 Arabidopsis thaliana
AT1G26380 10.0kb downstream 10.0kb downstream 10000 false Chr1: 9116737-9126736 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122338627 5261 Brassicaceae View MSA
123779181 5264 Brassicales-Malvales View MSA
124277511 5266 SBM View MSA
124254459 5268 Malvidae View MSA
124073888 5270 Rosid View MSA
123750008 5271 Pentapetalae View MSA
122797707 5272 Eudicot View MSA
122049918 5273 Angiosperm View MSA
121351151 5274 Embryophyte View MSA
123426970 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.429       High
cufflinks 0.431       Low
cufflinks 3.843        
cufflinks 3.706        
cufflinks 8.315        
cufflinks 1.211        

0 Strain