Gene : DOF1 A. thaliana TAIR10
Primary Identifier:  ? AT1G51700 Defline:  (1 of 36) PF02701 - Dof domain, zinc finger (zf-Dof)
Genomic Order:  4196 Name:  ? AT1G51700
Secondary Identifier:  ? PAC:19656471
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G51700 0.5kb upstream 0.5kb upstream 1620 true Chr1: 19173570-19175189 Arabidopsis thaliana
AT1G51700 0.5kb upstream 0.5kb upstream 500 false Chr1: 19173570-19174069 Arabidopsis thaliana
AT1G51700 0.5kb downstream 0.5kb downstream 1620 true Chr1: 19174070-19175689 Arabidopsis thaliana
AT1G51700 0.5kb downstream 0.5kb downstream 500 false Chr1: 19175190-19175689 Arabidopsis thaliana
AT1G51700 1.0kb upstream 1.0kb upstream 2120 true Chr1: 19173070-19175189 Arabidopsis thaliana
AT1G51700 1.0kb upstream 1.0kb upstream 1000 false Chr1: 19173070-19174069 Arabidopsis thaliana
AT1G51700 1.0kb downstream 1.0kb downstream 2120 true Chr1: 19174070-19176189 Arabidopsis thaliana
AT1G51700 1.0kb downstream 1.0kb downstream 1000 false Chr1: 19175190-19176189 Arabidopsis thaliana
AT1G51700 2.0kb upstream 2.0kb upstream 3120 true Chr1: 19172070-19175189 Arabidopsis thaliana
AT1G51700 2.0kb upstream 2.0kb upstream 2000 false Chr1: 19172070-19174069 Arabidopsis thaliana
AT1G51700 2.0kb downstream 2.0kb downstream 3120 true Chr1: 19174070-19177189 Arabidopsis thaliana
AT1G51700 2.0kb downstream 2.0kb downstream 2000 false Chr1: 19175190-19177189 Arabidopsis thaliana
AT1G51700 5.0kb upstream 5.0kb upstream 6120 true Chr1: 19169070-19175189 Arabidopsis thaliana
AT1G51700 5.0kb upstream 5.0kb upstream 5000 false Chr1: 19169070-19174069 Arabidopsis thaliana
AT1G51700 5.0kb downstream 5.0kb downstream 6120 true Chr1: 19174070-19180189 Arabidopsis thaliana
AT1G51700 5.0kb downstream 5.0kb downstream 5000 false Chr1: 19175190-19180189 Arabidopsis thaliana
AT1G51700 10.0kb upstream 10.0kb upstream 11120 true Chr1: 19164070-19175189 Arabidopsis thaliana
AT1G51700 10.0kb upstream 10.0kb upstream 10000 false Chr1: 19164070-19174069 Arabidopsis thaliana
AT1G51700 10.0kb downstream 10.0kb downstream 11120 true Chr1: 19174070-19185189 Arabidopsis thaliana
AT1G51700 10.0kb downstream 10.0kb downstream 10000 false Chr1: 19175190-19185189 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380875 5261 Brassicaceae View MSA
123802945 5264 Brassicales-Malvales View MSA
124349673 5266 SBM View MSA
124244728 5268 Malvidae View MSA
124067626 5270 Rosid View MSA
123747887 5271 Pentapetalae View MSA
122788322 5272 Eudicot View MSA
122050733 5273 Angiosperm View MSA
121349903 5274 Embryophyte View MSA
123427226 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.748        
cufflinks 38.236     High  
cufflinks 21.623        
cufflinks 37.051     High  
cufflinks 13.279       Low
cufflinks 36.345     High  

0 Strain