Gene : AT1G50670 A. thaliana TAIR10
Defline:  (1 of 1) K13719 - ubiquitin thioesterase OTU1 (OTU1, YOD1) Genomic Order:  4089
Name:  ? AT1G50670 Secondary Identifier:  ? PAC:19657414
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G50670 0.5kb upstream 0.5kb upstream 2604 true Chr1: 18774856-18777459 Arabidopsis thaliana
AT1G50670 0.5kb upstream 0.5kb upstream 500 false Chr1: 18776960-18777459 Arabidopsis thaliana
AT1G50670 0.5kb downstream 0.5kb downstream 2604 true Chr1: 18774356-18776959 Arabidopsis thaliana
AT1G50670 0.5kb downstream 0.5kb downstream 500 false Chr1: 18774356-18774855 Arabidopsis thaliana
AT1G50670 1.0kb upstream 1.0kb upstream 3104 true Chr1: 18774856-18777959 Arabidopsis thaliana
AT1G50670 1.0kb upstream 1.0kb upstream 1000 false Chr1: 18776960-18777959 Arabidopsis thaliana
AT1G50670 1.0kb downstream 1.0kb downstream 3104 true Chr1: 18773856-18776959 Arabidopsis thaliana
AT1G50670 1.0kb downstream 1.0kb downstream 1000 false Chr1: 18773856-18774855 Arabidopsis thaliana
AT1G50670 2.0kb upstream 2.0kb upstream 4104 true Chr1: 18774856-18778959 Arabidopsis thaliana
AT1G50670 2.0kb upstream 2.0kb upstream 2000 false Chr1: 18776960-18778959 Arabidopsis thaliana
AT1G50670 2.0kb downstream 2.0kb downstream 4104 true Chr1: 18772856-18776959 Arabidopsis thaliana
AT1G50670 2.0kb downstream 2.0kb downstream 2000 false Chr1: 18772856-18774855 Arabidopsis thaliana
AT1G50670 5.0kb upstream 5.0kb upstream 7104 true Chr1: 18774856-18781959 Arabidopsis thaliana
AT1G50670 5.0kb upstream 5.0kb upstream 5000 false Chr1: 18776960-18781959 Arabidopsis thaliana
AT1G50670 5.0kb downstream 5.0kb downstream 7104 true Chr1: 18769856-18776959 Arabidopsis thaliana
AT1G50670 5.0kb downstream 5.0kb downstream 5000 false Chr1: 18769856-18774855 Arabidopsis thaliana
AT1G50670 10.0kb upstream 10.0kb upstream 12104 true Chr1: 18774856-18786959 Arabidopsis thaliana
AT1G50670 10.0kb upstream 10.0kb upstream 10000 false Chr1: 18776960-18786959 Arabidopsis thaliana
AT1G50670 10.0kb downstream 10.0kb downstream 12104 true Chr1: 18764856-18776959 Arabidopsis thaliana
AT1G50670 10.0kb downstream 10.0kb downstream 10000 false Chr1: 18764856-18774855 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371218 5261 Brassicaceae View MSA
123827983 5264 Brassicales-Malvales View MSA
124337001 5266 SBM View MSA
124237421 5268 Malvidae View MSA
124061628 5270 Rosid View MSA
123738549 5271 Pentapetalae View MSA
122788500 5272 Eudicot View MSA
122046032 5273 Angiosperm View MSA
121345268 5274 Embryophyte View MSA
123424822 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.665        
cufflinks 20.335        
cufflinks 14.338        
cufflinks 21.138        
cufflinks 13.367       Low
cufflinks 21.442       High

0 Strain