Gene : AT1G50780 A. thaliana TAIR10
Defline:  (1 of 3) 1.2.3.1//1.2.3.7 - Aldehyde oxidase / Retinal oxidase // Indole-3-acetaldehyde oxidase / Indoleacetaldehyde oxidase Genomic Order:  4102
Name:  ? AT1G50780 Secondary Identifier:  ? PAC:19650191
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G50780 0.5kb upstream 0.5kb upstream 2311 true Chr1: 18820767-18823077 Arabidopsis thaliana
AT1G50780 0.5kb upstream 0.5kb upstream 500 false Chr1: 18820767-18821266 Arabidopsis thaliana
AT1G50780 0.5kb downstream 0.5kb downstream 2311 true Chr1: 18821267-18823577 Arabidopsis thaliana
AT1G50780 0.5kb downstream 0.5kb downstream 500 false Chr1: 18823078-18823577 Arabidopsis thaliana
AT1G50780 1.0kb upstream 1.0kb upstream 2811 true Chr1: 18820267-18823077 Arabidopsis thaliana
AT1G50780 1.0kb upstream 1.0kb upstream 1000 false Chr1: 18820267-18821266 Arabidopsis thaliana
AT1G50780 1.0kb downstream 1.0kb downstream 2811 true Chr1: 18821267-18824077 Arabidopsis thaliana
AT1G50780 1.0kb downstream 1.0kb downstream 1000 false Chr1: 18823078-18824077 Arabidopsis thaliana
AT1G50780 2.0kb upstream 2.0kb upstream 3811 true Chr1: 18819267-18823077 Arabidopsis thaliana
AT1G50780 2.0kb upstream 2.0kb upstream 2000 false Chr1: 18819267-18821266 Arabidopsis thaliana
AT1G50780 2.0kb downstream 2.0kb downstream 3811 true Chr1: 18821267-18825077 Arabidopsis thaliana
AT1G50780 2.0kb downstream 2.0kb downstream 2000 false Chr1: 18823078-18825077 Arabidopsis thaliana
AT1G50780 5.0kb upstream 5.0kb upstream 6811 true Chr1: 18816267-18823077 Arabidopsis thaliana
AT1G50780 5.0kb upstream 5.0kb upstream 5000 false Chr1: 18816267-18821266 Arabidopsis thaliana
AT1G50780 5.0kb downstream 5.0kb downstream 6811 true Chr1: 18821267-18828077 Arabidopsis thaliana
AT1G50780 5.0kb downstream 5.0kb downstream 5000 false Chr1: 18823078-18828077 Arabidopsis thaliana
AT1G50780 10.0kb upstream 10.0kb upstream 11811 true Chr1: 18811267-18823077 Arabidopsis thaliana
AT1G50780 10.0kb upstream 10.0kb upstream 10000 false Chr1: 18811267-18821266 Arabidopsis thaliana
AT1G50780 10.0kb downstream 10.0kb downstream 11811 true Chr1: 18821267-18833077 Arabidopsis thaliana
AT1G50780 10.0kb downstream 10.0kb downstream 10000 false Chr1: 18823078-18833077 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121512370 5273 Angiosperm View MSA
122381606 5261 Brassicaceae View MSA
123803334 5264 Brassicales-Malvales View MSA
124300450 5266 SBM View MSA
124151634 5268 Malvidae View MSA
123877029 5270 Rosid View MSA
123460619 5271 Pentapetalae View MSA
122495987 5272 Eudicot View MSA
120785391 5274 Embryophyte View MSA
122827257 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.165     Low  
cufflinks 0.69       High
cufflinks 0.056     Low Low
cufflinks 0.626        
cufflinks 0.06     Low Low
cufflinks 0.458        

0 Strain