Gene : AT1G50770 A. thaliana TAIR10
Defline:  (1 of 9) PTHR16007//PTHR16007:SF20 - EPIDIDYMAL MEMBRANE PROTEIN E9-RELATED // AMINOTRANSFERASE-LIKE, PLANT MOBILE DOMAIN FAMILY PROTEIN-RELATED Genomic Order:  4101
Name:  ? AT1G50770 Secondary Identifier:  ? PAC:19649624
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G50770 0.5kb upstream 0.5kb upstream 2445 true Chr1: 18818559-18821003 Arabidopsis thaliana
AT1G50770 0.5kb upstream 0.5kb upstream 500 false Chr1: 18820504-18821003 Arabidopsis thaliana
AT1G50770 0.5kb downstream 0.5kb downstream 2445 true Chr1: 18818059-18820503 Arabidopsis thaliana
AT1G50770 0.5kb downstream 0.5kb downstream 500 false Chr1: 18818059-18818558 Arabidopsis thaliana
AT1G50770 1.0kb upstream 1.0kb upstream 2945 true Chr1: 18818559-18821503 Arabidopsis thaliana
AT1G50770 1.0kb upstream 1.0kb upstream 1000 false Chr1: 18820504-18821503 Arabidopsis thaliana
AT1G50770 1.0kb downstream 1.0kb downstream 2945 true Chr1: 18817559-18820503 Arabidopsis thaliana
AT1G50770 1.0kb downstream 1.0kb downstream 1000 false Chr1: 18817559-18818558 Arabidopsis thaliana
AT1G50770 2.0kb upstream 2.0kb upstream 3945 true Chr1: 18818559-18822503 Arabidopsis thaliana
AT1G50770 2.0kb upstream 2.0kb upstream 2000 false Chr1: 18820504-18822503 Arabidopsis thaliana
AT1G50770 2.0kb downstream 2.0kb downstream 3945 true Chr1: 18816559-18820503 Arabidopsis thaliana
AT1G50770 2.0kb downstream 2.0kb downstream 2000 false Chr1: 18816559-18818558 Arabidopsis thaliana
AT1G50770 5.0kb upstream 5.0kb upstream 6945 true Chr1: 18818559-18825503 Arabidopsis thaliana
AT1G50770 5.0kb upstream 5.0kb upstream 5000 false Chr1: 18820504-18825503 Arabidopsis thaliana
AT1G50770 5.0kb downstream 5.0kb downstream 6945 true Chr1: 18813559-18820503 Arabidopsis thaliana
AT1G50770 5.0kb downstream 5.0kb downstream 5000 false Chr1: 18813559-18818558 Arabidopsis thaliana
AT1G50770 10.0kb upstream 10.0kb upstream 11945 true Chr1: 18818559-18830503 Arabidopsis thaliana
AT1G50770 10.0kb upstream 10.0kb upstream 10000 false Chr1: 18820504-18830503 Arabidopsis thaliana
AT1G50770 10.0kb downstream 10.0kb downstream 11945 true Chr1: 18808559-18820503 Arabidopsis thaliana
AT1G50770 10.0kb downstream 10.0kb downstream 10000 false Chr1: 18808559-18818558 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027649 5273 Angiosperm View MSA
122379376 5261 Brassicaceae View MSA
123802234 5264 Brassicales-Malvales View MSA
124299446 5266 SBM View MSA
124250657 5268 Malvidae View MSA
124071323 5270 Rosid View MSA
123752946 5271 Pentapetalae View MSA
122774876 5272 Eudicot View MSA
121297275 5274 Embryophyte View MSA
123335348 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.059     Low  
cufflinks 0.117     Low High
cufflinks 0.011     Low Low
cufflinks 0.051     Low  
cufflinks 0.017     Low  
cufflinks 0.082     Low  

0 Strain