Gene : AT1G49960 A. thaliana TAIR10
Defline:  (1 of 1) PTHR11119:SF51 - NUCLEOBASE-ASCORBATE TRANSPORTER 4 Genomic Order:  4023
Name:  ? AT1G49960 Secondary Identifier:  ? PAC:19657522
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G49960 0.5kb upstream 0.5kb upstream 3748 true Chr1: 18498139-18501886 Arabidopsis thaliana
AT1G49960 0.5kb upstream 0.5kb upstream 500 false Chr1: 18498139-18498638 Arabidopsis thaliana
AT1G49960 0.5kb downstream 0.5kb downstream 3748 true Chr1: 18498639-18502386 Arabidopsis thaliana
AT1G49960 0.5kb downstream 0.5kb downstream 500 false Chr1: 18501887-18502386 Arabidopsis thaliana
AT1G49960 1.0kb upstream 1.0kb upstream 4248 true Chr1: 18497639-18501886 Arabidopsis thaliana
AT1G49960 1.0kb upstream 1.0kb upstream 1000 false Chr1: 18497639-18498638 Arabidopsis thaliana
AT1G49960 1.0kb downstream 1.0kb downstream 4248 true Chr1: 18498639-18502886 Arabidopsis thaliana
AT1G49960 1.0kb downstream 1.0kb downstream 1000 false Chr1: 18501887-18502886 Arabidopsis thaliana
AT1G49960 2.0kb upstream 2.0kb upstream 5248 true Chr1: 18496639-18501886 Arabidopsis thaliana
AT1G49960 2.0kb upstream 2.0kb upstream 2000 false Chr1: 18496639-18498638 Arabidopsis thaliana
AT1G49960 2.0kb downstream 2.0kb downstream 5248 true Chr1: 18498639-18503886 Arabidopsis thaliana
AT1G49960 2.0kb downstream 2.0kb downstream 2000 false Chr1: 18501887-18503886 Arabidopsis thaliana
AT1G49960 5.0kb upstream 5.0kb upstream 8248 true Chr1: 18493639-18501886 Arabidopsis thaliana
AT1G49960 5.0kb upstream 5.0kb upstream 5000 false Chr1: 18493639-18498638 Arabidopsis thaliana
AT1G49960 5.0kb downstream 5.0kb downstream 8248 true Chr1: 18498639-18506886 Arabidopsis thaliana
AT1G49960 5.0kb downstream 5.0kb downstream 5000 false Chr1: 18501887-18506886 Arabidopsis thaliana
AT1G49960 10.0kb upstream 10.0kb upstream 13248 true Chr1: 18488639-18501886 Arabidopsis thaliana
AT1G49960 10.0kb upstream 10.0kb upstream 10000 false Chr1: 18488639-18498638 Arabidopsis thaliana
AT1G49960 10.0kb downstream 10.0kb downstream 13248 true Chr1: 18498639-18511886 Arabidopsis thaliana
AT1G49960 10.0kb downstream 10.0kb downstream 10000 false Chr1: 18501887-18511886 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791946 5273 Angiosperm View MSA
122370963 5261 Brassicaceae View MSA
123830284 5264 Brassicales-Malvales View MSA
124346513 5266 SBM View MSA
124244165 5268 Malvidae View MSA
124069449 5270 Rosid View MSA
123742105 5271 Pentapetalae View MSA
122795516 5272 Eudicot View MSA
121063213 5274 Embryophyte View MSA
123428829 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.041     Low  
cufflinks 3.688        
cufflinks 0.022     Low Low
cufflinks 6.819       High
cufflinks 0.08     Low  
cufflinks 5.248        

0 Strain