Gene : AT1G49470 A. thaliana TAIR10
Defline:  (1 of 1) PTHR16007//PTHR16007:SF14 - EPIDIDYMAL MEMBRANE PROTEIN E9-RELATED // SUBFAMILY NOT NAMED Genomic Order:  3973
Name:  ? AT1G49470 Secondary Identifier:  ? PAC:19649842
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G49470 0.5kb upstream 0.5kb upstream 1641 true Chr1: 18309994-18311634 Arabidopsis thaliana
AT1G49470 0.5kb upstream 0.5kb upstream 500 false Chr1: 18309994-18310493 Arabidopsis thaliana
AT1G49470 0.5kb downstream 0.5kb downstream 1641 true Chr1: 18310494-18312134 Arabidopsis thaliana
AT1G49470 0.5kb downstream 0.5kb downstream 500 false Chr1: 18311635-18312134 Arabidopsis thaliana
AT1G49470 1.0kb upstream 1.0kb upstream 2141 true Chr1: 18309494-18311634 Arabidopsis thaliana
AT1G49470 1.0kb upstream 1.0kb upstream 1000 false Chr1: 18309494-18310493 Arabidopsis thaliana
AT1G49470 1.0kb downstream 1.0kb downstream 2141 true Chr1: 18310494-18312634 Arabidopsis thaliana
AT1G49470 1.0kb downstream 1.0kb downstream 1000 false Chr1: 18311635-18312634 Arabidopsis thaliana
AT1G49470 2.0kb upstream 2.0kb upstream 3141 true Chr1: 18308494-18311634 Arabidopsis thaliana
AT1G49470 2.0kb upstream 2.0kb upstream 2000 false Chr1: 18308494-18310493 Arabidopsis thaliana
AT1G49470 2.0kb downstream 2.0kb downstream 3141 true Chr1: 18310494-18313634 Arabidopsis thaliana
AT1G49470 2.0kb downstream 2.0kb downstream 2000 false Chr1: 18311635-18313634 Arabidopsis thaliana
AT1G49470 5.0kb upstream 5.0kb upstream 6141 true Chr1: 18305494-18311634 Arabidopsis thaliana
AT1G49470 5.0kb upstream 5.0kb upstream 5000 false Chr1: 18305494-18310493 Arabidopsis thaliana
AT1G49470 5.0kb downstream 5.0kb downstream 6141 true Chr1: 18310494-18316634 Arabidopsis thaliana
AT1G49470 5.0kb downstream 5.0kb downstream 5000 false Chr1: 18311635-18316634 Arabidopsis thaliana
AT1G49470 10.0kb upstream 10.0kb upstream 11141 true Chr1: 18300494-18311634 Arabidopsis thaliana
AT1G49470 10.0kb upstream 10.0kb upstream 10000 false Chr1: 18300494-18310493 Arabidopsis thaliana
AT1G49470 10.0kb downstream 10.0kb downstream 11141 true Chr1: 18310494-18321634 Arabidopsis thaliana
AT1G49470 10.0kb downstream 10.0kb downstream 10000 false Chr1: 18311635-18321634 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029799 5273 Angiosperm View MSA
122363837 5261 Brassicaceae View MSA
123829099 5264 Brassicales-Malvales View MSA
124345867 5266 SBM View MSA
124240044 5268 Malvidae View MSA
124062949 5270 Rosid View MSA
123736459 5271 Pentapetalae View MSA
122791594 5272 Eudicot View MSA
121299075 5274 Embryophyte View MSA
123336998 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.803        
cufflinks 7.732        
cufflinks 4.061       Low
cufflinks 7.868        
cufflinks 5.659        
cufflinks 3.822       Low

0 Strain