Gene : AT1G49010 A. thaliana TAIR10
Defline:  (1 of 8) PTHR24078:SF261 - DNAJ (HSP40) HOMOLOG, SUBFAMILY A, MEMBER 3A Genomic Order:  3931
Name:  ? AT1G49010 Secondary Identifier:  ? PAC:19655695
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G49010 0.5kb upstream 0.5kb upstream 1781 true Chr1: 18132145-18133925 Arabidopsis thaliana
AT1G49010 0.5kb upstream 0.5kb upstream 500 false Chr1: 18132145-18132644 Arabidopsis thaliana
AT1G49010 0.5kb downstream 0.5kb downstream 1781 true Chr1: 18132645-18134425 Arabidopsis thaliana
AT1G49010 0.5kb downstream 0.5kb downstream 500 false Chr1: 18133926-18134425 Arabidopsis thaliana
AT1G49010 1.0kb upstream 1.0kb upstream 2281 true Chr1: 18131645-18133925 Arabidopsis thaliana
AT1G49010 1.0kb upstream 1.0kb upstream 1000 false Chr1: 18131645-18132644 Arabidopsis thaliana
AT1G49010 1.0kb downstream 1.0kb downstream 2281 true Chr1: 18132645-18134925 Arabidopsis thaliana
AT1G49010 1.0kb downstream 1.0kb downstream 1000 false Chr1: 18133926-18134925 Arabidopsis thaliana
AT1G49010 2.0kb upstream 2.0kb upstream 3281 true Chr1: 18130645-18133925 Arabidopsis thaliana
AT1G49010 2.0kb upstream 2.0kb upstream 2000 false Chr1: 18130645-18132644 Arabidopsis thaliana
AT1G49010 2.0kb downstream 2.0kb downstream 3281 true Chr1: 18132645-18135925 Arabidopsis thaliana
AT1G49010 2.0kb downstream 2.0kb downstream 2000 false Chr1: 18133926-18135925 Arabidopsis thaliana
AT1G49010 5.0kb upstream 5.0kb upstream 6281 true Chr1: 18127645-18133925 Arabidopsis thaliana
AT1G49010 5.0kb upstream 5.0kb upstream 5000 false Chr1: 18127645-18132644 Arabidopsis thaliana
AT1G49010 5.0kb downstream 5.0kb downstream 6281 true Chr1: 18132645-18138925 Arabidopsis thaliana
AT1G49010 5.0kb downstream 5.0kb downstream 5000 false Chr1: 18133926-18138925 Arabidopsis thaliana
AT1G49010 10.0kb upstream 10.0kb upstream 11281 true Chr1: 18122645-18133925 Arabidopsis thaliana
AT1G49010 10.0kb upstream 10.0kb upstream 10000 false Chr1: 18122645-18132644 Arabidopsis thaliana
AT1G49010 10.0kb downstream 10.0kb downstream 11281 true Chr1: 18132645-18143925 Arabidopsis thaliana
AT1G49010 10.0kb downstream 10.0kb downstream 10000 false Chr1: 18133926-18143925 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363911 5261 Brassicaceae View MSA
123839571 5264 Brassicales-Malvales View MSA
124337270 5266 SBM View MSA
124237049 5268 Malvidae View MSA
124068316 5270 Rosid View MSA
123750752 5271 Pentapetalae View MSA
122788591 5272 Eudicot View MSA
122045009 5273 Angiosperm View MSA
121349410 5274 Embryophyte View MSA
123426863 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.773       High
cufflinks 0.462        
cufflinks 18.751       High
cufflinks 0.422        
cufflinks 10.726        
cufflinks 0.552        

0 Strain