Gene : AT1G47710 A. thaliana TAIR10
Defline:  (1 of 12) K13963 - serpin B (SERPINB) Genomic Order:  3796
Name:  ? AT1G47710 Secondary Identifier:  ? PAC:19654117
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G47710 0.5kb upstream 0.5kb upstream 2561 true Chr1: 17557709-17560269 Arabidopsis thaliana
AT1G47710 0.5kb upstream 0.5kb upstream 500 false Chr1: 17557709-17558208 Arabidopsis thaliana
AT1G47710 0.5kb downstream 0.5kb downstream 2561 true Chr1: 17558209-17560769 Arabidopsis thaliana
AT1G47710 0.5kb downstream 0.5kb downstream 500 false Chr1: 17560270-17560769 Arabidopsis thaliana
AT1G47710 1.0kb upstream 1.0kb upstream 3061 true Chr1: 17557209-17560269 Arabidopsis thaliana
AT1G47710 1.0kb upstream 1.0kb upstream 1000 false Chr1: 17557209-17558208 Arabidopsis thaliana
AT1G47710 1.0kb downstream 1.0kb downstream 3061 true Chr1: 17558209-17561269 Arabidopsis thaliana
AT1G47710 1.0kb downstream 1.0kb downstream 1000 false Chr1: 17560270-17561269 Arabidopsis thaliana
AT1G47710 2.0kb upstream 2.0kb upstream 4061 true Chr1: 17556209-17560269 Arabidopsis thaliana
AT1G47710 2.0kb upstream 2.0kb upstream 2000 false Chr1: 17556209-17558208 Arabidopsis thaliana
AT1G47710 2.0kb downstream 2.0kb downstream 4061 true Chr1: 17558209-17562269 Arabidopsis thaliana
AT1G47710 2.0kb downstream 2.0kb downstream 2000 false Chr1: 17560270-17562269 Arabidopsis thaliana
AT1G47710 5.0kb upstream 5.0kb upstream 7061 true Chr1: 17553209-17560269 Arabidopsis thaliana
AT1G47710 5.0kb upstream 5.0kb upstream 5000 false Chr1: 17553209-17558208 Arabidopsis thaliana
AT1G47710 5.0kb downstream 5.0kb downstream 7061 true Chr1: 17558209-17565269 Arabidopsis thaliana
AT1G47710 5.0kb downstream 5.0kb downstream 5000 false Chr1: 17560270-17565269 Arabidopsis thaliana
AT1G47710 10.0kb upstream 10.0kb upstream 12061 true Chr1: 17548209-17560269 Arabidopsis thaliana
AT1G47710 10.0kb upstream 10.0kb upstream 10000 false Chr1: 17548209-17558208 Arabidopsis thaliana
AT1G47710 10.0kb downstream 10.0kb downstream 12061 true Chr1: 17558209-17570269 Arabidopsis thaliana
AT1G47710 10.0kb downstream 10.0kb downstream 10000 false Chr1: 17560270-17570269 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380668 5261 Brassicaceae View MSA
123832743 5264 Brassicales-Malvales View MSA
124344348 5266 SBM View MSA
124240047 5268 Malvidae View MSA
124062706 5270 Rosid View MSA
123739052 5271 Pentapetalae View MSA
122791581 5272 Eudicot View MSA
122043084 5273 Angiosperm View MSA
123428933 5275 Viridiplantae View MSA
121351155 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.249        
cufflinks 46.5     High High
cufflinks 21.653       Low
cufflinks 40.436     High  
cufflinks 24.599        
cufflinks 43.599     High  

0 Strain