Gene : RBP47C' A. thaliana TAIR10
Primary Identifier:  ? AT1G47500 Defline:  (1 of 4) PTHR24012:SF403 - POLYADENYLATE-BINDING PROTEIN RBP47A
Genomic Order:  3776 Name:  ? AT1G47500
Secondary Identifier:  ? PAC:19655831
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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G47500 0.5kb upstream 0.5kb upstream 3047 true Chr1: 17432018-17435064 Arabidopsis thaliana
AT1G47500 0.5kb upstream 0.5kb upstream 500 false Chr1: 17432018-17432517 Arabidopsis thaliana
AT1G47500 0.5kb downstream 0.5kb downstream 3047 true Chr1: 17432518-17435564 Arabidopsis thaliana
AT1G47500 0.5kb downstream 0.5kb downstream 500 false Chr1: 17435065-17435564 Arabidopsis thaliana
AT1G47500 1.0kb upstream 1.0kb upstream 3547 true Chr1: 17431518-17435064 Arabidopsis thaliana
AT1G47500 1.0kb upstream 1.0kb upstream 1000 false Chr1: 17431518-17432517 Arabidopsis thaliana
AT1G47500 1.0kb downstream 1.0kb downstream 3547 true Chr1: 17432518-17436064 Arabidopsis thaliana
AT1G47500 1.0kb downstream 1.0kb downstream 1000 false Chr1: 17435065-17436064 Arabidopsis thaliana
AT1G47500 2.0kb upstream 2.0kb upstream 4547 true Chr1: 17430518-17435064 Arabidopsis thaliana
AT1G47500 2.0kb upstream 2.0kb upstream 2000 false Chr1: 17430518-17432517 Arabidopsis thaliana
AT1G47500 2.0kb downstream 2.0kb downstream 4547 true Chr1: 17432518-17437064 Arabidopsis thaliana
AT1G47500 2.0kb downstream 2.0kb downstream 2000 false Chr1: 17435065-17437064 Arabidopsis thaliana
AT1G47500 5.0kb upstream 5.0kb upstream 7547 true Chr1: 17427518-17435064 Arabidopsis thaliana
AT1G47500 5.0kb upstream 5.0kb upstream 5000 false Chr1: 17427518-17432517 Arabidopsis thaliana
AT1G47500 5.0kb downstream 5.0kb downstream 7547 true Chr1: 17432518-17440064 Arabidopsis thaliana
AT1G47500 5.0kb downstream 5.0kb downstream 5000 false Chr1: 17435065-17440064 Arabidopsis thaliana
AT1G47500 10.0kb upstream 10.0kb upstream 12547 true Chr1: 17422518-17435064 Arabidopsis thaliana
AT1G47500 10.0kb upstream 10.0kb upstream 10000 false Chr1: 17422518-17432517 Arabidopsis thaliana
AT1G47500 10.0kb downstream 10.0kb downstream 12547 true Chr1: 17432518-17445064 Arabidopsis thaliana
AT1G47500 10.0kb downstream 10.0kb downstream 10000 false Chr1: 17435065-17445064 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377393 5261 Brassicaceae View MSA
123836440 5264 Brassicales-Malvales View MSA
124343009 5266 SBM View MSA
124239372 5268 Malvidae View MSA
124064535 5270 Rosid View MSA
123751271 5271 Pentapetalae View MSA
122796677 5272 Eudicot View MSA
122051452 5273 Angiosperm View MSA
121351371 5274 Embryophyte View MSA
123424048 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.756        
cufflinks 17.483        
cufflinks 16.132        
cufflinks 18.802        
cufflinks 14.327       Low
cufflinks 19.226       High

0 Strain