Gene : AT1G45230 A. thaliana TAIR10
Defline:  (1 of 5) PF11523 - Protein of unknown function (DUF3223) (DUF3223) Genomic Order:  3723
Name:  ? AT1G45230 Secondary Identifier:  ? PAC:19649666
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G45230 0.5kb upstream 0.5kb upstream 2436 true Chr1: 17169537-17171972 Arabidopsis thaliana
AT1G45230 0.5kb upstream 0.5kb upstream 500 false Chr1: 17171473-17171972 Arabidopsis thaliana
AT1G45230 0.5kb downstream 0.5kb downstream 2436 true Chr1: 17169037-17171472 Arabidopsis thaliana
AT1G45230 0.5kb downstream 0.5kb downstream 500 false Chr1: 17169037-17169536 Arabidopsis thaliana
AT1G45230 1.0kb upstream 1.0kb upstream 2936 true Chr1: 17169537-17172472 Arabidopsis thaliana
AT1G45230 1.0kb upstream 1.0kb upstream 1000 false Chr1: 17171473-17172472 Arabidopsis thaliana
AT1G45230 1.0kb downstream 1.0kb downstream 2936 true Chr1: 17168537-17171472 Arabidopsis thaliana
AT1G45230 1.0kb downstream 1.0kb downstream 1000 false Chr1: 17168537-17169536 Arabidopsis thaliana
AT1G45230 2.0kb upstream 2.0kb upstream 3936 true Chr1: 17169537-17173472 Arabidopsis thaliana
AT1G45230 2.0kb upstream 2.0kb upstream 2000 false Chr1: 17171473-17173472 Arabidopsis thaliana
AT1G45230 2.0kb downstream 2.0kb downstream 3936 true Chr1: 17167537-17171472 Arabidopsis thaliana
AT1G45230 2.0kb downstream 2.0kb downstream 2000 false Chr1: 17167537-17169536 Arabidopsis thaliana
AT1G45230 5.0kb upstream 5.0kb upstream 6936 true Chr1: 17169537-17176472 Arabidopsis thaliana
AT1G45230 5.0kb upstream 5.0kb upstream 5000 false Chr1: 17171473-17176472 Arabidopsis thaliana
AT1G45230 5.0kb downstream 5.0kb downstream 6936 true Chr1: 17164537-17171472 Arabidopsis thaliana
AT1G45230 5.0kb downstream 5.0kb downstream 5000 false Chr1: 17164537-17169536 Arabidopsis thaliana
AT1G45230 10.0kb upstream 10.0kb upstream 11936 true Chr1: 17169537-17181472 Arabidopsis thaliana
AT1G45230 10.0kb upstream 10.0kb upstream 10000 false Chr1: 17171473-17181472 Arabidopsis thaliana
AT1G45230 10.0kb downstream 10.0kb downstream 11936 true Chr1: 17159537-17171472 Arabidopsis thaliana
AT1G45230 10.0kb downstream 10.0kb downstream 10000 false Chr1: 17159537-17169536 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360382 5261 Brassicaceae View MSA
123828808 5264 Brassicales-Malvales View MSA
124345004 5266 SBM View MSA
124240655 5268 Malvidae View MSA
124072152 5270 Rosid View MSA
123751059 5271 Pentapetalae View MSA
122790326 5272 Eudicot View MSA
122047145 5273 Angiosperm View MSA
121351561 5274 Embryophyte View MSA
123426725 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.999       High
cufflinks 1.532        
cufflinks 12.591       High
cufflinks 1.609        
cufflinks 8.333        
cufflinks 1.09       Low

0 Strain