Gene : SBP1 A. thaliana TAIR10
Primary Identifier:  ? AT1G45976 Defline:  (1 of 1) PTHR10044:SF118 - F2G19.2
Genomic Order:  3730 Name:  ? AT1G45976
Secondary Identifier:  ? PAC:19651448
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G45976 0.5kb upstream 0.5kb upstream 1911 true Chr1: 17198825-17200735 Arabidopsis thaliana
AT1G45976 0.5kb upstream 0.5kb upstream 500 false Chr1: 17198825-17199324 Arabidopsis thaliana
AT1G45976 0.5kb downstream 0.5kb downstream 1911 true Chr1: 17199325-17201235 Arabidopsis thaliana
AT1G45976 0.5kb downstream 0.5kb downstream 500 false Chr1: 17200736-17201235 Arabidopsis thaliana
AT1G45976 1.0kb upstream 1.0kb upstream 2411 true Chr1: 17198325-17200735 Arabidopsis thaliana
AT1G45976 1.0kb upstream 1.0kb upstream 1000 false Chr1: 17198325-17199324 Arabidopsis thaliana
AT1G45976 1.0kb downstream 1.0kb downstream 2411 true Chr1: 17199325-17201735 Arabidopsis thaliana
AT1G45976 1.0kb downstream 1.0kb downstream 1000 false Chr1: 17200736-17201735 Arabidopsis thaliana
AT1G45976 2.0kb upstream 2.0kb upstream 3411 true Chr1: 17197325-17200735 Arabidopsis thaliana
AT1G45976 2.0kb upstream 2.0kb upstream 2000 false Chr1: 17197325-17199324 Arabidopsis thaliana
AT1G45976 2.0kb downstream 2.0kb downstream 3411 true Chr1: 17199325-17202735 Arabidopsis thaliana
AT1G45976 2.0kb downstream 2.0kb downstream 2000 false Chr1: 17200736-17202735 Arabidopsis thaliana
AT1G45976 5.0kb upstream 5.0kb upstream 6411 true Chr1: 17194325-17200735 Arabidopsis thaliana
AT1G45976 5.0kb upstream 5.0kb upstream 5000 false Chr1: 17194325-17199324 Arabidopsis thaliana
AT1G45976 5.0kb downstream 5.0kb downstream 6411 true Chr1: 17199325-17205735 Arabidopsis thaliana
AT1G45976 5.0kb downstream 5.0kb downstream 5000 false Chr1: 17200736-17205735 Arabidopsis thaliana
AT1G45976 10.0kb upstream 10.0kb upstream 11411 true Chr1: 17189325-17200735 Arabidopsis thaliana
AT1G45976 10.0kb upstream 10.0kb upstream 10000 false Chr1: 17189325-17199324 Arabidopsis thaliana
AT1G45976 10.0kb downstream 10.0kb downstream 11411 true Chr1: 17199325-17210735 Arabidopsis thaliana
AT1G45976 10.0kb downstream 10.0kb downstream 10000 false Chr1: 17200736-17210735 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370930 5261 Brassicaceae View MSA
123840031 5264 Brassicales-Malvales View MSA
124344721 5266 SBM View MSA
124250800 5268 Malvidae View MSA
124065103 5270 Rosid View MSA
123752259 5271 Pentapetalae View MSA
122794971 5272 Eudicot View MSA
122050089 5273 Angiosperm View MSA
121348016 5274 Embryophyte View MSA
123380706 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.944        
cufflinks 20.888       High
cufflinks 14.073       Low
cufflinks 22.604       High
cufflinks 16.069        
cufflinks 15.633        

0 Strain