Gene : AT1G44810 A. thaliana TAIR10
Defline:  (1 of 17) PTHR31662//PTHR31662:SF1 - FAMILY NOT NAMED // A_IG002N01.32 PROTEIN-RELATED Genomic Order:  3681
Name:  ? AT1G44810 Secondary Identifier:  ? PAC:19657387
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G44810 0.5kb upstream 0.5kb upstream 1779 true Chr1: 16923043-16924821 Arabidopsis thaliana
AT1G44810 0.5kb upstream 0.5kb upstream 500 false Chr1: 16923043-16923542 Arabidopsis thaliana
AT1G44810 0.5kb downstream 0.5kb downstream 1779 true Chr1: 16923543-16925321 Arabidopsis thaliana
AT1G44810 0.5kb downstream 0.5kb downstream 500 false Chr1: 16924822-16925321 Arabidopsis thaliana
AT1G44810 1.0kb upstream 1.0kb upstream 2279 true Chr1: 16922543-16924821 Arabidopsis thaliana
AT1G44810 1.0kb upstream 1.0kb upstream 1000 false Chr1: 16922543-16923542 Arabidopsis thaliana
AT1G44810 1.0kb downstream 1.0kb downstream 2279 true Chr1: 16923543-16925821 Arabidopsis thaliana
AT1G44810 1.0kb downstream 1.0kb downstream 1000 false Chr1: 16924822-16925821 Arabidopsis thaliana
AT1G44810 2.0kb upstream 2.0kb upstream 3279 true Chr1: 16921543-16924821 Arabidopsis thaliana
AT1G44810 2.0kb upstream 2.0kb upstream 2000 false Chr1: 16921543-16923542 Arabidopsis thaliana
AT1G44810 2.0kb downstream 2.0kb downstream 3279 true Chr1: 16923543-16926821 Arabidopsis thaliana
AT1G44810 2.0kb downstream 2.0kb downstream 2000 false Chr1: 16924822-16926821 Arabidopsis thaliana
AT1G44810 5.0kb upstream 5.0kb upstream 6279 true Chr1: 16918543-16924821 Arabidopsis thaliana
AT1G44810 5.0kb upstream 5.0kb upstream 5000 false Chr1: 16918543-16923542 Arabidopsis thaliana
AT1G44810 5.0kb downstream 5.0kb downstream 6279 true Chr1: 16923543-16929821 Arabidopsis thaliana
AT1G44810 5.0kb downstream 5.0kb downstream 5000 false Chr1: 16924822-16929821 Arabidopsis thaliana
AT1G44810 10.0kb upstream 10.0kb upstream 11279 true Chr1: 16913543-16924821 Arabidopsis thaliana
AT1G44810 10.0kb upstream 10.0kb upstream 10000 false Chr1: 16913543-16923542 Arabidopsis thaliana
AT1G44810 10.0kb downstream 10.0kb downstream 11279 true Chr1: 16923543-16934821 Arabidopsis thaliana
AT1G44810 10.0kb downstream 10.0kb downstream 10000 false Chr1: 16924822-16934821 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122338379 5261 Brassicaceae View MSA
123778959 5264 Brassicales-Malvales View MSA
124277293 5266 SBM View MSA
124132508 5268 Malvidae View MSA
123860801 5270 Rosid View MSA
123751469 5271 Pentapetalae View MSA
122797914 5272 Eudicot View MSA
122051487 5273 Angiosperm View MSA
121348911 5274 Embryophyte View MSA
123381074 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.395        
cufflinks 50.018     High  
cufflinks 21.21        
cufflinks 48.404     High  
cufflinks 18.775       Low
cufflinks 44.889     High  

0 Strain