Gene : AT1G44608 A. thaliana TAIR10
Defline:  (1 of 7) PF05340 - Protein of unknown function (DUF740) (DUF740) Genomic Order:  3672
Name:  ? AT1G44608 Secondary Identifier:  ? PAC:19652552
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G44608 0.5kb upstream 0.5kb upstream 1640 true Chr1: 16875119-16876758 Arabidopsis thaliana
AT1G44608 0.5kb upstream 0.5kb upstream 500 false Chr1: 16876259-16876758 Arabidopsis thaliana
AT1G44608 0.5kb downstream 0.5kb downstream 1640 true Chr1: 16874619-16876258 Arabidopsis thaliana
AT1G44608 0.5kb downstream 0.5kb downstream 500 false Chr1: 16874619-16875118 Arabidopsis thaliana
AT1G44608 1.0kb upstream 1.0kb upstream 2140 true Chr1: 16875119-16877258 Arabidopsis thaliana
AT1G44608 1.0kb upstream 1.0kb upstream 1000 false Chr1: 16876259-16877258 Arabidopsis thaliana
AT1G44608 1.0kb downstream 1.0kb downstream 2140 true Chr1: 16874119-16876258 Arabidopsis thaliana
AT1G44608 1.0kb downstream 1.0kb downstream 1000 false Chr1: 16874119-16875118 Arabidopsis thaliana
AT1G44608 2.0kb upstream 2.0kb upstream 3140 true Chr1: 16875119-16878258 Arabidopsis thaliana
AT1G44608 2.0kb upstream 2.0kb upstream 2000 false Chr1: 16876259-16878258 Arabidopsis thaliana
AT1G44608 2.0kb downstream 2.0kb downstream 3140 true Chr1: 16873119-16876258 Arabidopsis thaliana
AT1G44608 2.0kb downstream 2.0kb downstream 2000 false Chr1: 16873119-16875118 Arabidopsis thaliana
AT1G44608 5.0kb upstream 5.0kb upstream 6140 true Chr1: 16875119-16881258 Arabidopsis thaliana
AT1G44608 5.0kb upstream 5.0kb upstream 5000 false Chr1: 16876259-16881258 Arabidopsis thaliana
AT1G44608 5.0kb downstream 5.0kb downstream 6140 true Chr1: 16870119-16876258 Arabidopsis thaliana
AT1G44608 5.0kb downstream 5.0kb downstream 5000 false Chr1: 16870119-16875118 Arabidopsis thaliana
AT1G44608 10.0kb upstream 10.0kb upstream 11140 true Chr1: 16875119-16886258 Arabidopsis thaliana
AT1G44608 10.0kb upstream 10.0kb upstream 10000 false Chr1: 16876259-16886258 Arabidopsis thaliana
AT1G44608 10.0kb downstream 10.0kb downstream 11140 true Chr1: 16865119-16876258 Arabidopsis thaliana
AT1G44608 10.0kb downstream 10.0kb downstream 10000 false Chr1: 16865119-16875118 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511331 5273 Angiosperm View MSA
122375296 5261 Brassicaceae View MSA
123800924 5264 Brassicales-Malvales View MSA
124298280 5266 SBM View MSA
124149960 5268 Malvidae View MSA
123875667 5270 Rosid View MSA
123459453 5271 Pentapetalae View MSA
122494844 5272 Eudicot View MSA
120784381 5274 Embryophyte View MSA
122826301 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.291        
cufflinks 0.463        
cufflinks 0.179     Low Low
cufflinks 1.143       High
cufflinks 0.246        
cufflinks 1.421       High

0 Strain