Gene : BTF3 A. thaliana TAIR10
Primary Identifier:  ? AT1G17880 Defline:  (1 of 2) K01527 - nascent polypeptide-associated complex subunit beta (EGD1, BTF3)
Genomic Order:  1802 Name:  ? AT1G17880
Secondary Identifier:  ? PAC:19655238
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G17880 0.5kb upstream 0.5kb upstream 2074 true Chr1: 6152409-6154482 Arabidopsis thaliana
AT1G17880 0.5kb upstream 0.5kb upstream 500 false Chr1: 6153983-6154482 Arabidopsis thaliana
AT1G17880 0.5kb downstream 0.5kb downstream 2074 true Chr1: 6151909-6153982 Arabidopsis thaliana
AT1G17880 0.5kb downstream 0.5kb downstream 500 false Chr1: 6151909-6152408 Arabidopsis thaliana
AT1G17880 1.0kb upstream 1.0kb upstream 2574 true Chr1: 6152409-6154982 Arabidopsis thaliana
AT1G17880 1.0kb upstream 1.0kb upstream 1000 false Chr1: 6153983-6154982 Arabidopsis thaliana
AT1G17880 1.0kb downstream 1.0kb downstream 2574 true Chr1: 6151409-6153982 Arabidopsis thaliana
AT1G17880 1.0kb downstream 1.0kb downstream 1000 false Chr1: 6151409-6152408 Arabidopsis thaliana
AT1G17880 2.0kb upstream 2.0kb upstream 3574 true Chr1: 6152409-6155982 Arabidopsis thaliana
AT1G17880 2.0kb upstream 2.0kb upstream 2000 false Chr1: 6153983-6155982 Arabidopsis thaliana
AT1G17880 2.0kb downstream 2.0kb downstream 3574 true Chr1: 6150409-6153982 Arabidopsis thaliana
AT1G17880 2.0kb downstream 2.0kb downstream 2000 false Chr1: 6150409-6152408 Arabidopsis thaliana
AT1G17880 5.0kb upstream 5.0kb upstream 6574 true Chr1: 6152409-6158982 Arabidopsis thaliana
AT1G17880 5.0kb upstream 5.0kb upstream 5000 false Chr1: 6153983-6158982 Arabidopsis thaliana
AT1G17880 5.0kb downstream 5.0kb downstream 6574 true Chr1: 6147409-6153982 Arabidopsis thaliana
AT1G17880 5.0kb downstream 5.0kb downstream 5000 false Chr1: 6147409-6152408 Arabidopsis thaliana
AT1G17880 10.0kb upstream 10.0kb upstream 11574 true Chr1: 6152409-6163982 Arabidopsis thaliana
AT1G17880 10.0kb upstream 10.0kb upstream 10000 false Chr1: 6153983-6163982 Arabidopsis thaliana
AT1G17880 10.0kb downstream 10.0kb downstream 11574 true Chr1: 6142409-6153982 Arabidopsis thaliana
AT1G17880 10.0kb downstream 10.0kb downstream 10000 false Chr1: 6142409-6152408 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367937 5261 Brassicaceae View MSA
123836188 5264 Brassicales-Malvales View MSA
124343146 5266 SBM View MSA
124251473 5268 Malvidae View MSA
124060990 5270 Rosid View MSA
123752380 5271 Pentapetalae View MSA
122793181 5272 Eudicot View MSA
122044361 5273 Angiosperm View MSA
121348079 5274 Embryophyte View MSA
123423973 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 65.397     High  
cufflinks 77.985     High  
cufflinks 71.685     High  
cufflinks 77.999     High  
cufflinks 59.619     High Low
cufflinks 84.037     High High

0 Strain