Gene : AT1G16870 A. thaliana TAIR10
Defline:  (1 of 1) K17408 - small subunit ribosomal protein S29 (DAP3, MRPS29) Genomic Order:  1695
Name:  ? AT1G16870 Secondary Identifier:  ? PAC:19658320
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G16870 0.5kb upstream 0.5kb upstream 3020 true Chr1: 5770732-5773751 Arabidopsis thaliana
AT1G16870 0.5kb upstream 0.5kb upstream 500 false Chr1: 5773252-5773751 Arabidopsis thaliana
AT1G16870 0.5kb downstream 0.5kb downstream 3020 true Chr1: 5770232-5773251 Arabidopsis thaliana
AT1G16870 0.5kb downstream 0.5kb downstream 500 false Chr1: 5770232-5770731 Arabidopsis thaliana
AT1G16870 1.0kb upstream 1.0kb upstream 3520 true Chr1: 5770732-5774251 Arabidopsis thaliana
AT1G16870 1.0kb upstream 1.0kb upstream 1000 false Chr1: 5773252-5774251 Arabidopsis thaliana
AT1G16870 1.0kb downstream 1.0kb downstream 3520 true Chr1: 5769732-5773251 Arabidopsis thaliana
AT1G16870 1.0kb downstream 1.0kb downstream 1000 false Chr1: 5769732-5770731 Arabidopsis thaliana
AT1G16870 2.0kb upstream 2.0kb upstream 4520 true Chr1: 5770732-5775251 Arabidopsis thaliana
AT1G16870 2.0kb upstream 2.0kb upstream 2000 false Chr1: 5773252-5775251 Arabidopsis thaliana
AT1G16870 2.0kb downstream 2.0kb downstream 4520 true Chr1: 5768732-5773251 Arabidopsis thaliana
AT1G16870 2.0kb downstream 2.0kb downstream 2000 false Chr1: 5768732-5770731 Arabidopsis thaliana
AT1G16870 5.0kb upstream 5.0kb upstream 7520 true Chr1: 5770732-5778251 Arabidopsis thaliana
AT1G16870 5.0kb upstream 5.0kb upstream 5000 false Chr1: 5773252-5778251 Arabidopsis thaliana
AT1G16870 5.0kb downstream 5.0kb downstream 7520 true Chr1: 5765732-5773251 Arabidopsis thaliana
AT1G16870 5.0kb downstream 5.0kb downstream 5000 false Chr1: 5765732-5770731 Arabidopsis thaliana
AT1G16870 10.0kb upstream 10.0kb upstream 12520 true Chr1: 5770732-5783251 Arabidopsis thaliana
AT1G16870 10.0kb upstream 10.0kb upstream 10000 false Chr1: 5773252-5783251 Arabidopsis thaliana
AT1G16870 10.0kb downstream 10.0kb downstream 12520 true Chr1: 5760732-5773251 Arabidopsis thaliana
AT1G16870 10.0kb downstream 10.0kb downstream 10000 false Chr1: 5760732-5770731 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372200 5261 Brassicaceae View MSA
123831681 5264 Brassicales-Malvales View MSA
124338031 5266 SBM View MSA
124239852 5268 Malvidae View MSA
124061885 5270 Rosid View MSA
123738752 5271 Pentapetalae View MSA
122794378 5272 Eudicot View MSA
122042057 5273 Angiosperm View MSA
121345138 5274 Embryophyte View MSA
123424162 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.81        
cufflinks 12.375        
cufflinks 10.852        
cufflinks 14.311        
cufflinks 9.297       Low
cufflinks 15.298       High

0 Strain