Gene : AT1G16810 A. thaliana TAIR10
Defline:  (1 of 1) PTHR13282:SF6 - PROTEIN FAM32A Genomic Order:  1687
Name:  ? AT1G16810 Secondary Identifier:  ? PAC:19654505
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G16810 0.5kb upstream 0.5kb upstream 1808 true Chr1: 5755088-5756895 Arabidopsis thaliana
AT1G16810 0.5kb upstream 0.5kb upstream 500 false Chr1: 5755088-5755587 Arabidopsis thaliana
AT1G16810 0.5kb downstream 0.5kb downstream 1808 true Chr1: 5755588-5757395 Arabidopsis thaliana
AT1G16810 0.5kb downstream 0.5kb downstream 500 false Chr1: 5756896-5757395 Arabidopsis thaliana
AT1G16810 1.0kb upstream 1.0kb upstream 2308 true Chr1: 5754588-5756895 Arabidopsis thaliana
AT1G16810 1.0kb upstream 1.0kb upstream 1000 false Chr1: 5754588-5755587 Arabidopsis thaliana
AT1G16810 1.0kb downstream 1.0kb downstream 2308 true Chr1: 5755588-5757895 Arabidopsis thaliana
AT1G16810 1.0kb downstream 1.0kb downstream 1000 false Chr1: 5756896-5757895 Arabidopsis thaliana
AT1G16810 2.0kb upstream 2.0kb upstream 3308 true Chr1: 5753588-5756895 Arabidopsis thaliana
AT1G16810 2.0kb upstream 2.0kb upstream 2000 false Chr1: 5753588-5755587 Arabidopsis thaliana
AT1G16810 2.0kb downstream 2.0kb downstream 3308 true Chr1: 5755588-5758895 Arabidopsis thaliana
AT1G16810 2.0kb downstream 2.0kb downstream 2000 false Chr1: 5756896-5758895 Arabidopsis thaliana
AT1G16810 5.0kb upstream 5.0kb upstream 6308 true Chr1: 5750588-5756895 Arabidopsis thaliana
AT1G16810 5.0kb upstream 5.0kb upstream 5000 false Chr1: 5750588-5755587 Arabidopsis thaliana
AT1G16810 5.0kb downstream 5.0kb downstream 6308 true Chr1: 5755588-5761895 Arabidopsis thaliana
AT1G16810 5.0kb downstream 5.0kb downstream 5000 false Chr1: 5756896-5761895 Arabidopsis thaliana
AT1G16810 10.0kb upstream 10.0kb upstream 11308 true Chr1: 5745588-5756895 Arabidopsis thaliana
AT1G16810 10.0kb upstream 10.0kb upstream 10000 false Chr1: 5745588-5755587 Arabidopsis thaliana
AT1G16810 10.0kb downstream 10.0kb downstream 11308 true Chr1: 5755588-5766895 Arabidopsis thaliana
AT1G16810 10.0kb downstream 10.0kb downstream 10000 false Chr1: 5756896-5766895 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381345 5261 Brassicaceae View MSA
123836155 5264 Brassicales-Malvales View MSA
124338072 5266 SBM View MSA
124248671 5268 Malvidae View MSA
124062928 5270 Rosid View MSA
123751058 5271 Pentapetalae View MSA
122788003 5272 Eudicot View MSA
122045426 5273 Angiosperm View MSA
121347666 5274 Embryophyte View MSA
123426193 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.957        
cufflinks 25.177        
cufflinks 18.648       Low
cufflinks 25.478        
cufflinks 19.597        
cufflinks 26.933       High

0 Strain