Gene : MYB58 A. thaliana TAIR10
Primary Identifier:  ? AT1G16490 Defline:  (1 of 4) PTHR10641:SF462 - F3O9.29 PROTEIN-RELATED
Genomic Order:  1658 Name:  ? AT1G16490
Secondary Identifier:  ? PAC:19655690
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G16490 0.5kb upstream 0.5kb upstream 1841 true Chr1: 5629655-5631495 Arabidopsis thaliana
AT1G16490 0.5kb upstream 0.5kb upstream 500 false Chr1: 5630996-5631495 Arabidopsis thaliana
AT1G16490 0.5kb downstream 0.5kb downstream 1841 true Chr1: 5629155-5630995 Arabidopsis thaliana
AT1G16490 0.5kb downstream 0.5kb downstream 500 false Chr1: 5629155-5629654 Arabidopsis thaliana
AT1G16490 1.0kb upstream 1.0kb upstream 2341 true Chr1: 5629655-5631995 Arabidopsis thaliana
AT1G16490 1.0kb upstream 1.0kb upstream 1000 false Chr1: 5630996-5631995 Arabidopsis thaliana
AT1G16490 1.0kb downstream 1.0kb downstream 2341 true Chr1: 5628655-5630995 Arabidopsis thaliana
AT1G16490 1.0kb downstream 1.0kb downstream 1000 false Chr1: 5628655-5629654 Arabidopsis thaliana
AT1G16490 2.0kb upstream 2.0kb upstream 3341 true Chr1: 5629655-5632995 Arabidopsis thaliana
AT1G16490 2.0kb upstream 2.0kb upstream 2000 false Chr1: 5630996-5632995 Arabidopsis thaliana
AT1G16490 2.0kb downstream 2.0kb downstream 3341 true Chr1: 5627655-5630995 Arabidopsis thaliana
AT1G16490 2.0kb downstream 2.0kb downstream 2000 false Chr1: 5627655-5629654 Arabidopsis thaliana
AT1G16490 5.0kb upstream 5.0kb upstream 6341 true Chr1: 5629655-5635995 Arabidopsis thaliana
AT1G16490 5.0kb upstream 5.0kb upstream 5000 false Chr1: 5630996-5635995 Arabidopsis thaliana
AT1G16490 5.0kb downstream 5.0kb downstream 6341 true Chr1: 5624655-5630995 Arabidopsis thaliana
AT1G16490 5.0kb downstream 5.0kb downstream 5000 false Chr1: 5624655-5629654 Arabidopsis thaliana
AT1G16490 10.0kb upstream 10.0kb upstream 11341 true Chr1: 5629655-5640995 Arabidopsis thaliana
AT1G16490 10.0kb upstream 10.0kb upstream 10000 false Chr1: 5630996-5640995 Arabidopsis thaliana
AT1G16490 10.0kb downstream 10.0kb downstream 11341 true Chr1: 5619655-5630995 Arabidopsis thaliana
AT1G16490 10.0kb downstream 10.0kb downstream 10000 false Chr1: 5619655-5629654 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360590 5261 Brassicaceae View MSA
123797984 5264 Brassicales-Malvales View MSA
124295675 5266 SBM View MSA
124148050 5268 Malvidae View MSA
124069456 5270 Rosid View MSA
123753515 5271 Pentapetalae View MSA
122794930 5272 Eudicot View MSA
122045941 5273 Angiosperm View MSA
121350389 5274 Embryophyte View MSA
123381710 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.631        
cufflinks 2.306        
cufflinks 0.875        
cufflinks 3.848       High
cufflinks 0.532       Low
cufflinks 2.58        

0 Strain