Gene : RAD23A A. thaliana TAIR10
Primary Identifier:  ? AT1G16190 Defline:  (1 of 2) PTHR10621//PTHR10621:SF9 - UV EXCISION REPAIR PROTEIN RAD23 // F12F1.16 PROTEIN-RELATED
Genomic Order:  1628 Name:  ? AT1G16190
Secondary Identifier:  ? PAC:19654129
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G16190 0.5kb upstream 0.5kb upstream 3452 true Chr1: 5542652-5546103 Arabidopsis thaliana
AT1G16190 0.5kb upstream 0.5kb upstream 500 false Chr1: 5542652-5543151 Arabidopsis thaliana
AT1G16190 0.5kb downstream 0.5kb downstream 3452 true Chr1: 5543152-5546603 Arabidopsis thaliana
AT1G16190 0.5kb downstream 0.5kb downstream 500 false Chr1: 5546104-5546603 Arabidopsis thaliana
AT1G16190 1.0kb upstream 1.0kb upstream 3952 true Chr1: 5542152-5546103 Arabidopsis thaliana
AT1G16190 1.0kb upstream 1.0kb upstream 1000 false Chr1: 5542152-5543151 Arabidopsis thaliana
AT1G16190 1.0kb downstream 1.0kb downstream 3952 true Chr1: 5543152-5547103 Arabidopsis thaliana
AT1G16190 1.0kb downstream 1.0kb downstream 1000 false Chr1: 5546104-5547103 Arabidopsis thaliana
AT1G16190 2.0kb upstream 2.0kb upstream 4952 true Chr1: 5541152-5546103 Arabidopsis thaliana
AT1G16190 2.0kb upstream 2.0kb upstream 2000 false Chr1: 5541152-5543151 Arabidopsis thaliana
AT1G16190 2.0kb downstream 2.0kb downstream 4952 true Chr1: 5543152-5548103 Arabidopsis thaliana
AT1G16190 2.0kb downstream 2.0kb downstream 2000 false Chr1: 5546104-5548103 Arabidopsis thaliana
AT1G16190 5.0kb upstream 5.0kb upstream 7952 true Chr1: 5538152-5546103 Arabidopsis thaliana
AT1G16190 5.0kb upstream 5.0kb upstream 5000 false Chr1: 5538152-5543151 Arabidopsis thaliana
AT1G16190 5.0kb downstream 5.0kb downstream 7952 true Chr1: 5543152-5551103 Arabidopsis thaliana
AT1G16190 5.0kb downstream 5.0kb downstream 5000 false Chr1: 5546104-5551103 Arabidopsis thaliana
AT1G16190 10.0kb upstream 10.0kb upstream 12952 true Chr1: 5533152-5546103 Arabidopsis thaliana
AT1G16190 10.0kb upstream 10.0kb upstream 10000 false Chr1: 5533152-5543151 Arabidopsis thaliana
AT1G16190 10.0kb downstream 10.0kb downstream 12952 true Chr1: 5543152-5556103 Arabidopsis thaliana
AT1G16190 10.0kb downstream 10.0kb downstream 10000 false Chr1: 5546104-5556103 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363949 5261 Brassicaceae View MSA
123839172 5264 Brassicales-Malvales View MSA
124341735 5266 SBM View MSA
124250812 5268 Malvidae View MSA
124061824 5270 Rosid View MSA
123740240 5271 Pentapetalae View MSA
122785996 5272 Eudicot View MSA
122046102 5273 Angiosperm View MSA
121350140 5274 Embryophyte View MSA
123423951 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.279        
cufflinks 14.523        
cufflinks 5.523        
cufflinks 13.016        
cufflinks 4.908       Low
cufflinks 15.772       High

0 Strain