Gene : AT1G15030 A. thaliana TAIR10
Defline:  (1 of 11) PF05623 - Protein of unknown function (DUF789) (DUF789) Genomic Order:  1509
Name:  ? AT1G15030 Secondary Identifier:  ? PAC:19653173
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G15030 0.5kb upstream 0.5kb upstream 3021 true Chr1: 5177029-5180049 Arabidopsis thaliana
AT1G15030 0.5kb upstream 0.5kb upstream 500 false Chr1: 5177029-5177528 Arabidopsis thaliana
AT1G15030 0.5kb downstream 0.5kb downstream 3021 true Chr1: 5177529-5180549 Arabidopsis thaliana
AT1G15030 0.5kb downstream 0.5kb downstream 500 false Chr1: 5180050-5180549 Arabidopsis thaliana
AT1G15030 1.0kb upstream 1.0kb upstream 3521 true Chr1: 5176529-5180049 Arabidopsis thaliana
AT1G15030 1.0kb upstream 1.0kb upstream 1000 false Chr1: 5176529-5177528 Arabidopsis thaliana
AT1G15030 1.0kb downstream 1.0kb downstream 3521 true Chr1: 5177529-5181049 Arabidopsis thaliana
AT1G15030 1.0kb downstream 1.0kb downstream 1000 false Chr1: 5180050-5181049 Arabidopsis thaliana
AT1G15030 2.0kb upstream 2.0kb upstream 4521 true Chr1: 5175529-5180049 Arabidopsis thaliana
AT1G15030 2.0kb upstream 2.0kb upstream 2000 false Chr1: 5175529-5177528 Arabidopsis thaliana
AT1G15030 2.0kb downstream 2.0kb downstream 4521 true Chr1: 5177529-5182049 Arabidopsis thaliana
AT1G15030 2.0kb downstream 2.0kb downstream 2000 false Chr1: 5180050-5182049 Arabidopsis thaliana
AT1G15030 5.0kb upstream 5.0kb upstream 7521 true Chr1: 5172529-5180049 Arabidopsis thaliana
AT1G15030 5.0kb upstream 5.0kb upstream 5000 false Chr1: 5172529-5177528 Arabidopsis thaliana
AT1G15030 5.0kb downstream 5.0kb downstream 7521 true Chr1: 5177529-5185049 Arabidopsis thaliana
AT1G15030 5.0kb downstream 5.0kb downstream 5000 false Chr1: 5180050-5185049 Arabidopsis thaliana
AT1G15030 10.0kb upstream 10.0kb upstream 12521 true Chr1: 5167529-5180049 Arabidopsis thaliana
AT1G15030 10.0kb upstream 10.0kb upstream 10000 false Chr1: 5167529-5177528 Arabidopsis thaliana
AT1G15030 10.0kb downstream 10.0kb downstream 12521 true Chr1: 5177529-5190049 Arabidopsis thaliana
AT1G15030 10.0kb downstream 10.0kb downstream 10000 false Chr1: 5180050-5190049 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370520 5261 Brassicaceae View MSA
123799979 5264 Brassicales-Malvales View MSA
124297445 5266 SBM View MSA
124149334 5268 Malvidae View MSA
123875159 5270 Rosid View MSA
123749810 5271 Pentapetalae View MSA
122797134 5272 Eudicot View MSA
122049051 5273 Angiosperm View MSA
121347224 5274 Embryophyte View MSA
123425809 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.68       High
cufflinks 13.707        
cufflinks 16.656        
cufflinks 13.061        
cufflinks 17.704       High
cufflinks 12.382       Low

0 Strain