Gene : AT1G15150 A. thaliana TAIR10
Defline:  (1 of 14) PTHR11206:SF87 - MATE EFFLUX FAMILY PROTEIN-RELATED Genomic Order:  1521
Name:  ? AT1G15150 Secondary Identifier:  ? PAC:19657555
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G15150 0.5kb upstream 0.5kb upstream 2744 true Chr1: 5212115-5214858 Arabidopsis thaliana
AT1G15150 0.5kb upstream 0.5kb upstream 500 false Chr1: 5212115-5212614 Arabidopsis thaliana
AT1G15150 0.5kb downstream 0.5kb downstream 2744 true Chr1: 5212615-5215358 Arabidopsis thaliana
AT1G15150 0.5kb downstream 0.5kb downstream 500 false Chr1: 5214859-5215358 Arabidopsis thaliana
AT1G15150 1.0kb upstream 1.0kb upstream 3244 true Chr1: 5211615-5214858 Arabidopsis thaliana
AT1G15150 1.0kb upstream 1.0kb upstream 1000 false Chr1: 5211615-5212614 Arabidopsis thaliana
AT1G15150 1.0kb downstream 1.0kb downstream 3244 true Chr1: 5212615-5215858 Arabidopsis thaliana
AT1G15150 1.0kb downstream 1.0kb downstream 1000 false Chr1: 5214859-5215858 Arabidopsis thaliana
AT1G15150 2.0kb upstream 2.0kb upstream 4244 true Chr1: 5210615-5214858 Arabidopsis thaliana
AT1G15150 2.0kb upstream 2.0kb upstream 2000 false Chr1: 5210615-5212614 Arabidopsis thaliana
AT1G15150 2.0kb downstream 2.0kb downstream 4244 true Chr1: 5212615-5216858 Arabidopsis thaliana
AT1G15150 2.0kb downstream 2.0kb downstream 2000 false Chr1: 5214859-5216858 Arabidopsis thaliana
AT1G15150 5.0kb upstream 5.0kb upstream 7244 true Chr1: 5207615-5214858 Arabidopsis thaliana
AT1G15150 5.0kb upstream 5.0kb upstream 5000 false Chr1: 5207615-5212614 Arabidopsis thaliana
AT1G15150 5.0kb downstream 5.0kb downstream 7244 true Chr1: 5212615-5219858 Arabidopsis thaliana
AT1G15150 5.0kb downstream 5.0kb downstream 5000 false Chr1: 5214859-5219858 Arabidopsis thaliana
AT1G15150 10.0kb upstream 10.0kb upstream 12244 true Chr1: 5202615-5214858 Arabidopsis thaliana
AT1G15150 10.0kb upstream 10.0kb upstream 10000 false Chr1: 5202615-5212614 Arabidopsis thaliana
AT1G15150 10.0kb downstream 10.0kb downstream 12244 true Chr1: 5212615-5224858 Arabidopsis thaliana
AT1G15150 10.0kb downstream 10.0kb downstream 10000 false Chr1: 5214859-5224858 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122331707 5261 Brassicaceae View MSA
123772861 5264 Brassicales-Malvales View MSA
124271368 5266 SBM View MSA
124254486 5268 Malvidae View MSA
124070136 5270 Rosid View MSA
123747121 5271 Pentapetalae View MSA
122794225 5272 Eudicot View MSA
122042479 5273 Angiosperm View MSA
121350842 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.062     Low  
cufflinks 0.014     Low Low
cufflinks 0.082     Low  
cufflinks 0.059     Low  
cufflinks 0.092     Low  
cufflinks 0.015     Low Low

0 Strain