Gene : AT1G15760 A. thaliana TAIR10
Defline:  (1 of 6) PF07647 - SAM domain (Sterile alpha motif) (SAM_2) Genomic Order:  1583
Name:  ? AT1G15760 Secondary Identifier:  ? PAC:19653966
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G15760 0.5kb upstream 0.5kb upstream 1109 true Chr1: 5425214-5426322 Arabidopsis thaliana
AT1G15760 0.5kb upstream 0.5kb upstream 500 false Chr1: 5425214-5425713 Arabidopsis thaliana
AT1G15760 0.5kb downstream 0.5kb downstream 1109 true Chr1: 5425714-5426822 Arabidopsis thaliana
AT1G15760 0.5kb downstream 0.5kb downstream 500 false Chr1: 5426323-5426822 Arabidopsis thaliana
AT1G15760 1.0kb upstream 1.0kb upstream 1609 true Chr1: 5424714-5426322 Arabidopsis thaliana
AT1G15760 1.0kb upstream 1.0kb upstream 1000 false Chr1: 5424714-5425713 Arabidopsis thaliana
AT1G15760 1.0kb downstream 1.0kb downstream 1609 true Chr1: 5425714-5427322 Arabidopsis thaliana
AT1G15760 1.0kb downstream 1.0kb downstream 1000 false Chr1: 5426323-5427322 Arabidopsis thaliana
AT1G15760 2.0kb upstream 2.0kb upstream 2609 true Chr1: 5423714-5426322 Arabidopsis thaliana
AT1G15760 2.0kb upstream 2.0kb upstream 2000 false Chr1: 5423714-5425713 Arabidopsis thaliana
AT1G15760 2.0kb downstream 2.0kb downstream 2609 true Chr1: 5425714-5428322 Arabidopsis thaliana
AT1G15760 2.0kb downstream 2.0kb downstream 2000 false Chr1: 5426323-5428322 Arabidopsis thaliana
AT1G15760 5.0kb upstream 5.0kb upstream 5609 true Chr1: 5420714-5426322 Arabidopsis thaliana
AT1G15760 5.0kb upstream 5.0kb upstream 5000 false Chr1: 5420714-5425713 Arabidopsis thaliana
AT1G15760 5.0kb downstream 5.0kb downstream 5609 true Chr1: 5425714-5431322 Arabidopsis thaliana
AT1G15760 5.0kb downstream 5.0kb downstream 5000 false Chr1: 5426323-5431322 Arabidopsis thaliana
AT1G15760 10.0kb upstream 10.0kb upstream 10609 true Chr1: 5415714-5426322 Arabidopsis thaliana
AT1G15760 10.0kb upstream 10.0kb upstream 10000 false Chr1: 5415714-5425713 Arabidopsis thaliana
AT1G15760 10.0kb downstream 10.0kb downstream 10609 true Chr1: 5425714-5436322 Arabidopsis thaliana
AT1G15760 10.0kb downstream 10.0kb downstream 10000 false Chr1: 5426323-5436322 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361786 5261 Brassicaceae View MSA
123839675 5264 Brassicales-Malvales View MSA
124344189 5266 SBM View MSA
124242329 5268 Malvidae View MSA
124063066 5270 Rosid View MSA
123745428 5271 Pentapetalae View MSA
122789154 5272 Eudicot View MSA
122048035 5273 Angiosperm View MSA
121310835 5274 Embryophyte View MSA
123348222 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.723        
cufflinks 14.949        
cufflinks 0.727       Low
cufflinks 17.098        
cufflinks 0.678       Low
cufflinks 17.531        

0 Strain