Gene : AFP2 A. thaliana TAIR10
Primary Identifier:  ? AT1G13740 Defline:  (1 of 3) PTHR31413//PTHR31413:SF4 - FAMILY NOT NAMED // NINJA-FAMILY PROTEIN AFP1-RELATED
Genomic Order:  1368 Name:  ? AT1G13740
Secondary Identifier:  ? PAC:19654906
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G13740 0.5kb upstream 0.5kb upstream 2234 true Chr1: 4713174-4715407 Arabidopsis thaliana
AT1G13740 0.5kb upstream 0.5kb upstream 500 false Chr1: 4713174-4713673 Arabidopsis thaliana
AT1G13740 0.5kb downstream 0.5kb downstream 2234 true Chr1: 4713674-4715907 Arabidopsis thaliana
AT1G13740 0.5kb downstream 0.5kb downstream 500 false Chr1: 4715408-4715907 Arabidopsis thaliana
AT1G13740 1.0kb upstream 1.0kb upstream 2734 true Chr1: 4712674-4715407 Arabidopsis thaliana
AT1G13740 1.0kb upstream 1.0kb upstream 1000 false Chr1: 4712674-4713673 Arabidopsis thaliana
AT1G13740 1.0kb downstream 1.0kb downstream 2734 true Chr1: 4713674-4716407 Arabidopsis thaliana
AT1G13740 1.0kb downstream 1.0kb downstream 1000 false Chr1: 4715408-4716407 Arabidopsis thaliana
AT1G13740 2.0kb upstream 2.0kb upstream 3734 true Chr1: 4711674-4715407 Arabidopsis thaliana
AT1G13740 2.0kb upstream 2.0kb upstream 2000 false Chr1: 4711674-4713673 Arabidopsis thaliana
AT1G13740 2.0kb downstream 2.0kb downstream 3734 true Chr1: 4713674-4717407 Arabidopsis thaliana
AT1G13740 2.0kb downstream 2.0kb downstream 2000 false Chr1: 4715408-4717407 Arabidopsis thaliana
AT1G13740 5.0kb upstream 5.0kb upstream 6734 true Chr1: 4708674-4715407 Arabidopsis thaliana
AT1G13740 5.0kb upstream 5.0kb upstream 5000 false Chr1: 4708674-4713673 Arabidopsis thaliana
AT1G13740 5.0kb downstream 5.0kb downstream 6734 true Chr1: 4713674-4720407 Arabidopsis thaliana
AT1G13740 5.0kb downstream 5.0kb downstream 5000 false Chr1: 4715408-4720407 Arabidopsis thaliana
AT1G13740 10.0kb upstream 10.0kb upstream 11734 true Chr1: 4703674-4715407 Arabidopsis thaliana
AT1G13740 10.0kb upstream 10.0kb upstream 10000 false Chr1: 4703674-4713673 Arabidopsis thaliana
AT1G13740 10.0kb downstream 10.0kb downstream 11734 true Chr1: 4713674-4725407 Arabidopsis thaliana
AT1G13740 10.0kb downstream 10.0kb downstream 10000 false Chr1: 4715408-4725407 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370751 5261 Brassicaceae View MSA
123841111 5264 Brassicales-Malvales View MSA
124349458 5266 SBM View MSA
124251961 5268 Malvidae View MSA
124071046 5270 Rosid View MSA
123753389 5271 Pentapetalae View MSA
122792096 5272 Eudicot View MSA
122050177 5273 Angiosperm View MSA
121311781 5274 Embryophyte View MSA
123349031 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.484        
cufflinks 5.109        
cufflinks 6.166        
cufflinks 9.068       High
cufflinks 6.294        
cufflinks 3.062       Low

0 Strain