Gene : AT1G13730 A. thaliana TAIR10
Defline:  (1 of 2) PTHR10693//PTHR10693:SF27 - RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN // NUCLEAR TRANSPORT FACTOR 2 AND RNA RECOGNITION MOTIF DOMAIN-CONTAINING PROTEIN Genomic Order:  1367
Name:  ? AT1G13730 Secondary Identifier:  ? PAC:19656266
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G13730 0.5kb upstream 0.5kb upstream 3227 true Chr1: 4709324-4712550 Arabidopsis thaliana
AT1G13730 0.5kb upstream 0.5kb upstream 500 false Chr1: 4709324-4709823 Arabidopsis thaliana
AT1G13730 0.5kb downstream 0.5kb downstream 3227 true Chr1: 4709824-4713050 Arabidopsis thaliana
AT1G13730 0.5kb downstream 0.5kb downstream 500 false Chr1: 4712551-4713050 Arabidopsis thaliana
AT1G13730 1.0kb upstream 1.0kb upstream 3727 true Chr1: 4708824-4712550 Arabidopsis thaliana
AT1G13730 1.0kb upstream 1.0kb upstream 1000 false Chr1: 4708824-4709823 Arabidopsis thaliana
AT1G13730 1.0kb downstream 1.0kb downstream 3727 true Chr1: 4709824-4713550 Arabidopsis thaliana
AT1G13730 1.0kb downstream 1.0kb downstream 1000 false Chr1: 4712551-4713550 Arabidopsis thaliana
AT1G13730 2.0kb upstream 2.0kb upstream 4727 true Chr1: 4707824-4712550 Arabidopsis thaliana
AT1G13730 2.0kb upstream 2.0kb upstream 2000 false Chr1: 4707824-4709823 Arabidopsis thaliana
AT1G13730 2.0kb downstream 2.0kb downstream 4727 true Chr1: 4709824-4714550 Arabidopsis thaliana
AT1G13730 2.0kb downstream 2.0kb downstream 2000 false Chr1: 4712551-4714550 Arabidopsis thaliana
AT1G13730 5.0kb upstream 5.0kb upstream 7727 true Chr1: 4704824-4712550 Arabidopsis thaliana
AT1G13730 5.0kb upstream 5.0kb upstream 5000 false Chr1: 4704824-4709823 Arabidopsis thaliana
AT1G13730 5.0kb downstream 5.0kb downstream 7727 true Chr1: 4709824-4717550 Arabidopsis thaliana
AT1G13730 5.0kb downstream 5.0kb downstream 5000 false Chr1: 4712551-4717550 Arabidopsis thaliana
AT1G13730 10.0kb upstream 10.0kb upstream 12727 true Chr1: 4699824-4712550 Arabidopsis thaliana
AT1G13730 10.0kb upstream 10.0kb upstream 10000 false Chr1: 4699824-4709823 Arabidopsis thaliana
AT1G13730 10.0kb downstream 10.0kb downstream 12727 true Chr1: 4709824-4722550 Arabidopsis thaliana
AT1G13730 10.0kb downstream 10.0kb downstream 10000 false Chr1: 4712551-4722550 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361800 5261 Brassicaceae View MSA
123839234 5264 Brassicales-Malvales View MSA
124322585 5266 SBM View MSA
124253817 5268 Malvidae View MSA
124070986 5270 Rosid View MSA
123751309 5271 Pentapetalae View MSA
122795066 5272 Eudicot View MSA
122049730 5273 Angiosperm View MSA
121351180 5274 Embryophyte View MSA
123426443 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.809        
cufflinks 11.243        
cufflinks 6.071        
cufflinks 13.795        
cufflinks 4.279       Low
cufflinks 14.842       High

0 Strain