Gene : LAG13 A. thaliana TAIR10
Primary Identifier:  ? AT1G13580 Defline:  (1 of 1) K04710 - ceramide synthetase (CERS)
Genomic Order:  1349 Name:  ? AT1G13580
Secondary Identifier:  ? PAC:19656657
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G13580 0.5kb upstream 0.5kb upstream 2987 true Chr1: 4644521-4647507 Arabidopsis thaliana
AT1G13580 0.5kb upstream 0.5kb upstream 500 false Chr1: 4647008-4647507 Arabidopsis thaliana
AT1G13580 0.5kb downstream 0.5kb downstream 2987 true Chr1: 4644021-4647007 Arabidopsis thaliana
AT1G13580 0.5kb downstream 0.5kb downstream 500 false Chr1: 4644021-4644520 Arabidopsis thaliana
AT1G13580 1.0kb upstream 1.0kb upstream 3487 true Chr1: 4644521-4648007 Arabidopsis thaliana
AT1G13580 1.0kb upstream 1.0kb upstream 1000 false Chr1: 4647008-4648007 Arabidopsis thaliana
AT1G13580 1.0kb downstream 1.0kb downstream 3487 true Chr1: 4643521-4647007 Arabidopsis thaliana
AT1G13580 1.0kb downstream 1.0kb downstream 1000 false Chr1: 4643521-4644520 Arabidopsis thaliana
AT1G13580 2.0kb upstream 2.0kb upstream 4487 true Chr1: 4644521-4649007 Arabidopsis thaliana
AT1G13580 2.0kb upstream 2.0kb upstream 2000 false Chr1: 4647008-4649007 Arabidopsis thaliana
AT1G13580 2.0kb downstream 2.0kb downstream 4487 true Chr1: 4642521-4647007 Arabidopsis thaliana
AT1G13580 2.0kb downstream 2.0kb downstream 2000 false Chr1: 4642521-4644520 Arabidopsis thaliana
AT1G13580 5.0kb upstream 5.0kb upstream 7487 true Chr1: 4644521-4652007 Arabidopsis thaliana
AT1G13580 5.0kb upstream 5.0kb upstream 5000 false Chr1: 4647008-4652007 Arabidopsis thaliana
AT1G13580 5.0kb downstream 5.0kb downstream 7487 true Chr1: 4639521-4647007 Arabidopsis thaliana
AT1G13580 5.0kb downstream 5.0kb downstream 5000 false Chr1: 4639521-4644520 Arabidopsis thaliana
AT1G13580 10.0kb upstream 10.0kb upstream 12487 true Chr1: 4644521-4657007 Arabidopsis thaliana
AT1G13580 10.0kb upstream 10.0kb upstream 10000 false Chr1: 4647008-4657007 Arabidopsis thaliana
AT1G13580 10.0kb downstream 10.0kb downstream 12487 true Chr1: 4634521-4647007 Arabidopsis thaliana
AT1G13580 10.0kb downstream 10.0kb downstream 10000 false Chr1: 4634521-4644520 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371082 5261 Brassicaceae View MSA
123838645 5264 Brassicales-Malvales View MSA
124347984 5266 SBM View MSA
124254290 5268 Malvidae View MSA
124065846 5270 Rosid View MSA
123739424 5271 Pentapetalae View MSA
122796577 5272 Eudicot View MSA
122046862 5273 Angiosperm View MSA
121348140 5274 Embryophyte View MSA
123428118 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.483        
cufflinks 2.936        
cufflinks 1.216       Low
cufflinks 2.902        
cufflinks 1.307        
cufflinks 3.27       High

0 Strain