Gene : AT1G12330 A. thaliana TAIR10
Defline:  (1 of 1) PTHR31029:SF4 - F5O11.6 Genomic Order:  1218
Name:  ? AT1G12330 Secondary Identifier:  ? PAC:19656132
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G12330 0.5kb upstream 0.5kb upstream 2592 true Chr1: 4194158-4196749 Arabidopsis thaliana
AT1G12330 0.5kb upstream 0.5kb upstream 500 false Chr1: 4194158-4194657 Arabidopsis thaliana
AT1G12330 0.5kb downstream 0.5kb downstream 2592 true Chr1: 4194658-4197249 Arabidopsis thaliana
AT1G12330 0.5kb downstream 0.5kb downstream 500 false Chr1: 4196750-4197249 Arabidopsis thaliana
AT1G12330 1.0kb upstream 1.0kb upstream 3092 true Chr1: 4193658-4196749 Arabidopsis thaliana
AT1G12330 1.0kb upstream 1.0kb upstream 1000 false Chr1: 4193658-4194657 Arabidopsis thaliana
AT1G12330 1.0kb downstream 1.0kb downstream 3092 true Chr1: 4194658-4197749 Arabidopsis thaliana
AT1G12330 1.0kb downstream 1.0kb downstream 1000 false Chr1: 4196750-4197749 Arabidopsis thaliana
AT1G12330 2.0kb upstream 2.0kb upstream 4092 true Chr1: 4192658-4196749 Arabidopsis thaliana
AT1G12330 2.0kb upstream 2.0kb upstream 2000 false Chr1: 4192658-4194657 Arabidopsis thaliana
AT1G12330 2.0kb downstream 2.0kb downstream 4092 true Chr1: 4194658-4198749 Arabidopsis thaliana
AT1G12330 2.0kb downstream 2.0kb downstream 2000 false Chr1: 4196750-4198749 Arabidopsis thaliana
AT1G12330 5.0kb upstream 5.0kb upstream 7092 true Chr1: 4189658-4196749 Arabidopsis thaliana
AT1G12330 5.0kb upstream 5.0kb upstream 5000 false Chr1: 4189658-4194657 Arabidopsis thaliana
AT1G12330 5.0kb downstream 5.0kb downstream 7092 true Chr1: 4194658-4201749 Arabidopsis thaliana
AT1G12330 5.0kb downstream 5.0kb downstream 5000 false Chr1: 4196750-4201749 Arabidopsis thaliana
AT1G12330 10.0kb upstream 10.0kb upstream 12092 true Chr1: 4184658-4196749 Arabidopsis thaliana
AT1G12330 10.0kb upstream 10.0kb upstream 10000 false Chr1: 4184658-4194657 Arabidopsis thaliana
AT1G12330 10.0kb downstream 10.0kb downstream 12092 true Chr1: 4194658-4206749 Arabidopsis thaliana
AT1G12330 10.0kb downstream 10.0kb downstream 10000 false Chr1: 4196750-4206749 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370762 5261 Brassicaceae View MSA
123840253 5264 Brassicales-Malvales View MSA
124346286 5266 SBM View MSA
124237399 5268 Malvidae View MSA
124067611 5270 Rosid View MSA
123751802 5271 Pentapetalae View MSA
122793081 5272 Eudicot View MSA
122049110 5273 Angiosperm View MSA
121351569 5274 Embryophyte View MSA
123382231 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.464       High
cufflinks 1.543        
cufflinks 5.304        
cufflinks 1.258        
cufflinks 3.756        
cufflinks 1.071       Low

0 Strain