Gene : AT1G12244 A. thaliana TAIR10
Defline:  (1 of 1) PTHR33317:SF2 - HOLLIDAY JUNCTION RESOLVASE-RELATED Genomic Order:  1209
Name:  ? AT1G12244 Secondary Identifier:  ? PAC:19653356
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G12244 0.5kb upstream 0.5kb upstream 1893 true Chr1: 4157154-4159046 Arabidopsis thaliana
AT1G12244 0.5kb upstream 0.5kb upstream 500 false Chr1: 4157154-4157653 Arabidopsis thaliana
AT1G12244 0.5kb downstream 0.5kb downstream 1893 true Chr1: 4157654-4159546 Arabidopsis thaliana
AT1G12244 0.5kb downstream 0.5kb downstream 500 false Chr1: 4159047-4159546 Arabidopsis thaliana
AT1G12244 1.0kb upstream 1.0kb upstream 2393 true Chr1: 4156654-4159046 Arabidopsis thaliana
AT1G12244 1.0kb upstream 1.0kb upstream 1000 false Chr1: 4156654-4157653 Arabidopsis thaliana
AT1G12244 1.0kb downstream 1.0kb downstream 2393 true Chr1: 4157654-4160046 Arabidopsis thaliana
AT1G12244 1.0kb downstream 1.0kb downstream 1000 false Chr1: 4159047-4160046 Arabidopsis thaliana
AT1G12244 2.0kb upstream 2.0kb upstream 3393 true Chr1: 4155654-4159046 Arabidopsis thaliana
AT1G12244 2.0kb upstream 2.0kb upstream 2000 false Chr1: 4155654-4157653 Arabidopsis thaliana
AT1G12244 2.0kb downstream 2.0kb downstream 3393 true Chr1: 4157654-4161046 Arabidopsis thaliana
AT1G12244 2.0kb downstream 2.0kb downstream 2000 false Chr1: 4159047-4161046 Arabidopsis thaliana
AT1G12244 5.0kb upstream 5.0kb upstream 6393 true Chr1: 4152654-4159046 Arabidopsis thaliana
AT1G12244 5.0kb upstream 5.0kb upstream 5000 false Chr1: 4152654-4157653 Arabidopsis thaliana
AT1G12244 5.0kb downstream 5.0kb downstream 6393 true Chr1: 4157654-4164046 Arabidopsis thaliana
AT1G12244 5.0kb downstream 5.0kb downstream 5000 false Chr1: 4159047-4164046 Arabidopsis thaliana
AT1G12244 10.0kb upstream 10.0kb upstream 11393 true Chr1: 4147654-4159046 Arabidopsis thaliana
AT1G12244 10.0kb upstream 10.0kb upstream 10000 false Chr1: 4147654-4157653 Arabidopsis thaliana
AT1G12244 10.0kb downstream 10.0kb downstream 11393 true Chr1: 4157654-4169046 Arabidopsis thaliana
AT1G12244 10.0kb downstream 10.0kb downstream 10000 false Chr1: 4159047-4169046 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374207 5261 Brassicaceae View MSA
123832338 5264 Brassicales-Malvales View MSA
124321794 5266 SBM View MSA
124240539 5268 Malvidae View MSA
124062281 5270 Rosid View MSA
123739595 5271 Pentapetalae View MSA
122790899 5272 Eudicot View MSA
122046304 5273 Angiosperm View MSA
121343915 5274 Embryophyte View MSA
123426695 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.347       High
cufflinks 4.891        
cufflinks 6.284       High
cufflinks 4.589        
cufflinks 4.82        
cufflinks 4.935        

0 Strain