Gene : AT1G11230 A. thaliana TAIR10
Defline:  (1 of 5) PTHR33098:SF10 - T28P6.11 PROTEIN Genomic Order:  1094
Name:  ? AT1G11230 Secondary Identifier:  ? PAC:19651470
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G11230 0.5kb upstream 0.5kb upstream 1716 true Chr1: 3763268-3764983 Arabidopsis thaliana
AT1G11230 0.5kb upstream 0.5kb upstream 500 false Chr1: 3764484-3764983 Arabidopsis thaliana
AT1G11230 0.5kb downstream 0.5kb downstream 1716 true Chr1: 3762768-3764483 Arabidopsis thaliana
AT1G11230 0.5kb downstream 0.5kb downstream 500 false Chr1: 3762768-3763267 Arabidopsis thaliana
AT1G11230 1.0kb upstream 1.0kb upstream 2216 true Chr1: 3763268-3765483 Arabidopsis thaliana
AT1G11230 1.0kb upstream 1.0kb upstream 1000 false Chr1: 3764484-3765483 Arabidopsis thaliana
AT1G11230 1.0kb downstream 1.0kb downstream 2216 true Chr1: 3762268-3764483 Arabidopsis thaliana
AT1G11230 1.0kb downstream 1.0kb downstream 1000 false Chr1: 3762268-3763267 Arabidopsis thaliana
AT1G11230 2.0kb upstream 2.0kb upstream 3216 true Chr1: 3763268-3766483 Arabidopsis thaliana
AT1G11230 2.0kb upstream 2.0kb upstream 2000 false Chr1: 3764484-3766483 Arabidopsis thaliana
AT1G11230 2.0kb downstream 2.0kb downstream 3216 true Chr1: 3761268-3764483 Arabidopsis thaliana
AT1G11230 2.0kb downstream 2.0kb downstream 2000 false Chr1: 3761268-3763267 Arabidopsis thaliana
AT1G11230 5.0kb upstream 5.0kb upstream 6216 true Chr1: 3763268-3769483 Arabidopsis thaliana
AT1G11230 5.0kb upstream 5.0kb upstream 5000 false Chr1: 3764484-3769483 Arabidopsis thaliana
AT1G11230 5.0kb downstream 5.0kb downstream 6216 true Chr1: 3758268-3764483 Arabidopsis thaliana
AT1G11230 5.0kb downstream 5.0kb downstream 5000 false Chr1: 3758268-3763267 Arabidopsis thaliana
AT1G11230 10.0kb upstream 10.0kb upstream 11216 true Chr1: 3763268-3774483 Arabidopsis thaliana
AT1G11230 10.0kb upstream 10.0kb upstream 10000 false Chr1: 3764484-3774483 Arabidopsis thaliana
AT1G11230 10.0kb downstream 10.0kb downstream 11216 true Chr1: 3753268-3764483 Arabidopsis thaliana
AT1G11230 10.0kb downstream 10.0kb downstream 10000 false Chr1: 3753268-3763267 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377684 5261 Brassicaceae View MSA
123838356 5264 Brassicales-Malvales View MSA
124350734 5266 SBM View MSA
124251466 5268 Malvidae View MSA
124070091 5270 Rosid View MSA
123750199 5271 Pentapetalae View MSA
122796107 5272 Eudicot View MSA
122050129 5273 Angiosperm View MSA
121311757 5274 Embryophyte View MSA
123349012 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.034     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain