Gene : AT1G11220 A. thaliana TAIR10
Defline:  (1 of 5) PTHR33098:SF10 - T28P6.11 PROTEIN Genomic Order:  1093
Name:  ? AT1G11220 Secondary Identifier:  ? PAC:19653698
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G11220 0.5kb upstream 0.5kb upstream 1804 true Chr1: 3759862-3761665 Arabidopsis thaliana
AT1G11220 0.5kb upstream 0.5kb upstream 500 false Chr1: 3761166-3761665 Arabidopsis thaliana
AT1G11220 0.5kb downstream 0.5kb downstream 1804 true Chr1: 3759362-3761165 Arabidopsis thaliana
AT1G11220 0.5kb downstream 0.5kb downstream 500 false Chr1: 3759362-3759861 Arabidopsis thaliana
AT1G11220 1.0kb upstream 1.0kb upstream 2304 true Chr1: 3759862-3762165 Arabidopsis thaliana
AT1G11220 1.0kb upstream 1.0kb upstream 1000 false Chr1: 3761166-3762165 Arabidopsis thaliana
AT1G11220 1.0kb downstream 1.0kb downstream 2304 true Chr1: 3758862-3761165 Arabidopsis thaliana
AT1G11220 1.0kb downstream 1.0kb downstream 1000 false Chr1: 3758862-3759861 Arabidopsis thaliana
AT1G11220 2.0kb upstream 2.0kb upstream 3304 true Chr1: 3759862-3763165 Arabidopsis thaliana
AT1G11220 2.0kb upstream 2.0kb upstream 2000 false Chr1: 3761166-3763165 Arabidopsis thaliana
AT1G11220 2.0kb downstream 2.0kb downstream 3304 true Chr1: 3757862-3761165 Arabidopsis thaliana
AT1G11220 2.0kb downstream 2.0kb downstream 2000 false Chr1: 3757862-3759861 Arabidopsis thaliana
AT1G11220 5.0kb upstream 5.0kb upstream 6304 true Chr1: 3759862-3766165 Arabidopsis thaliana
AT1G11220 5.0kb upstream 5.0kb upstream 5000 false Chr1: 3761166-3766165 Arabidopsis thaliana
AT1G11220 5.0kb downstream 5.0kb downstream 6304 true Chr1: 3754862-3761165 Arabidopsis thaliana
AT1G11220 5.0kb downstream 5.0kb downstream 5000 false Chr1: 3754862-3759861 Arabidopsis thaliana
AT1G11220 10.0kb upstream 10.0kb upstream 11304 true Chr1: 3759862-3771165 Arabidopsis thaliana
AT1G11220 10.0kb upstream 10.0kb upstream 10000 false Chr1: 3761166-3771165 Arabidopsis thaliana
AT1G11220 10.0kb downstream 10.0kb downstream 11304 true Chr1: 3749862-3761165 Arabidopsis thaliana
AT1G11220 10.0kb downstream 10.0kb downstream 10000 false Chr1: 3749862-3759861 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377684 5261 Brassicaceae View MSA
123838356 5264 Brassicales-Malvales View MSA
124350734 5266 SBM View MSA
124251466 5268 Malvidae View MSA
124070091 5270 Rosid View MSA
123750199 5271 Pentapetalae View MSA
122796107 5272 Eudicot View MSA
122050129 5273 Angiosperm View MSA
121311757 5274 Embryophyte View MSA
123349012 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.676        
cufflinks 2.149        
cufflinks 1.344       Low
cufflinks 2.142        
cufflinks 1.293       Low
cufflinks 2.802       High

0 Strain