Gene : SOFL1 A. thaliana TAIR10
Primary Identifier:  ? AT1G26210 Defline:  SOB five-like 1
Genomic Order:  2584 Name:  ? AT1G26210
Secondary Identifier:  ? PAC:19657276
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G26210 0.5kb upstream 0.5kb upstream 1669 true Chr1: 9066539-9068207 Arabidopsis thaliana
AT1G26210 0.5kb upstream 0.5kb upstream 500 false Chr1: 9066539-9067038 Arabidopsis thaliana
AT1G26210 0.5kb downstream 0.5kb downstream 1669 true Chr1: 9067039-9068707 Arabidopsis thaliana
AT1G26210 0.5kb downstream 0.5kb downstream 500 false Chr1: 9068208-9068707 Arabidopsis thaliana
AT1G26210 1.0kb upstream 1.0kb upstream 2169 true Chr1: 9066039-9068207 Arabidopsis thaliana
AT1G26210 1.0kb upstream 1.0kb upstream 1000 false Chr1: 9066039-9067038 Arabidopsis thaliana
AT1G26210 1.0kb downstream 1.0kb downstream 2169 true Chr1: 9067039-9069207 Arabidopsis thaliana
AT1G26210 1.0kb downstream 1.0kb downstream 1000 false Chr1: 9068208-9069207 Arabidopsis thaliana
AT1G26210 2.0kb upstream 2.0kb upstream 3169 true Chr1: 9065039-9068207 Arabidopsis thaliana
AT1G26210 2.0kb upstream 2.0kb upstream 2000 false Chr1: 9065039-9067038 Arabidopsis thaliana
AT1G26210 2.0kb downstream 2.0kb downstream 3169 true Chr1: 9067039-9070207 Arabidopsis thaliana
AT1G26210 2.0kb downstream 2.0kb downstream 2000 false Chr1: 9068208-9070207 Arabidopsis thaliana
AT1G26210 5.0kb upstream 5.0kb upstream 6169 true Chr1: 9062039-9068207 Arabidopsis thaliana
AT1G26210 5.0kb upstream 5.0kb upstream 5000 false Chr1: 9062039-9067038 Arabidopsis thaliana
AT1G26210 5.0kb downstream 5.0kb downstream 6169 true Chr1: 9067039-9073207 Arabidopsis thaliana
AT1G26210 5.0kb downstream 5.0kb downstream 5000 false Chr1: 9068208-9073207 Arabidopsis thaliana
AT1G26210 10.0kb upstream 10.0kb upstream 11169 true Chr1: 9057039-9068207 Arabidopsis thaliana
AT1G26210 10.0kb upstream 10.0kb upstream 10000 false Chr1: 9057039-9067038 Arabidopsis thaliana
AT1G26210 10.0kb downstream 10.0kb downstream 11169 true Chr1: 9067039-9078207 Arabidopsis thaliana
AT1G26210 10.0kb downstream 10.0kb downstream 10000 false Chr1: 9068208-9078207 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028773 5273 Angiosperm View MSA
122380800 5261 Brassicaceae View MSA
123837306 5264 Brassicales-Malvales View MSA
124345740 5266 SBM View MSA
124251694 5268 Malvidae View MSA
124062684 5270 Rosid View MSA
123745811 5271 Pentapetalae View MSA
122796444 5272 Eudicot View MSA
121298217 5274 Embryophyte View MSA
123336203 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.967       High
cufflinks 1.047        
cufflinks 6.923        
cufflinks 1.0        
cufflinks 5.217        
cufflinks 0.708       Low

0 Strain