Gene : AT1G25211 A. thaliana TAIR10
Defline:  (1 of 66) PTHR32133//PTHR32133:SF120 - FAMILY NOT NAMED // F-BOX ASSOCIATED UBIQUITINATION EFFECTOR FAMILY PROTEIN-RELATED Genomic Order:  2528
Name:  ? AT1G25211 Secondary Identifier:  ? PAC:19657717
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G25211 0.5kb upstream 0.5kb upstream 2122 true Chr1: 8834886-8837007 Arabidopsis thaliana
AT1G25211 0.5kb upstream 0.5kb upstream 500 false Chr1: 8834886-8835385 Arabidopsis thaliana
AT1G25211 0.5kb downstream 0.5kb downstream 2122 true Chr1: 8835386-8837507 Arabidopsis thaliana
AT1G25211 0.5kb downstream 0.5kb downstream 500 false Chr1: 8837008-8837507 Arabidopsis thaliana
AT1G25211 1.0kb upstream 1.0kb upstream 2622 true Chr1: 8834386-8837007 Arabidopsis thaliana
AT1G25211 1.0kb upstream 1.0kb upstream 1000 false Chr1: 8834386-8835385 Arabidopsis thaliana
AT1G25211 1.0kb downstream 1.0kb downstream 2622 true Chr1: 8835386-8838007 Arabidopsis thaliana
AT1G25211 1.0kb downstream 1.0kb downstream 1000 false Chr1: 8837008-8838007 Arabidopsis thaliana
AT1G25211 2.0kb upstream 2.0kb upstream 3622 true Chr1: 8833386-8837007 Arabidopsis thaliana
AT1G25211 2.0kb upstream 2.0kb upstream 2000 false Chr1: 8833386-8835385 Arabidopsis thaliana
AT1G25211 2.0kb downstream 2.0kb downstream 3622 true Chr1: 8835386-8839007 Arabidopsis thaliana
AT1G25211 2.0kb downstream 2.0kb downstream 2000 false Chr1: 8837008-8839007 Arabidopsis thaliana
AT1G25211 5.0kb upstream 5.0kb upstream 6622 true Chr1: 8830386-8837007 Arabidopsis thaliana
AT1G25211 5.0kb upstream 5.0kb upstream 5000 false Chr1: 8830386-8835385 Arabidopsis thaliana
AT1G25211 5.0kb downstream 5.0kb downstream 6622 true Chr1: 8835386-8842007 Arabidopsis thaliana
AT1G25211 5.0kb downstream 5.0kb downstream 5000 false Chr1: 8837008-8842007 Arabidopsis thaliana
AT1G25211 10.0kb upstream 10.0kb upstream 11622 true Chr1: 8825386-8837007 Arabidopsis thaliana
AT1G25211 10.0kb upstream 10.0kb upstream 10000 false Chr1: 8825386-8835385 Arabidopsis thaliana
AT1G25211 10.0kb downstream 10.0kb downstream 11622 true Chr1: 8835386-8847007 Arabidopsis thaliana
AT1G25211 10.0kb downstream 10.0kb downstream 10000 false Chr1: 8837008-8847007 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511871 5273 Angiosperm View MSA
122379296 5261 Brassicaceae View MSA
123802195 5264 Brassicales-Malvales View MSA
124299409 5266 SBM View MSA
124150829 5268 Malvidae View MSA
123876378 5270 Rosid View MSA
123460060 5271 Pentapetalae View MSA
122495440 5272 Eudicot View MSA
120784898 5274 Embryophyte View MSA
122826780 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.726        
cufflinks 6.898        
cufflinks 5.283       Low
cufflinks 8.019       High
cufflinks 6.275        
cufflinks 7.408        

0 Strain