Gene : AT1G24380 A. thaliana TAIR10
Defline:  (1 of 2) PTHR11260:SF144 - F21J9.4 Genomic Order:  2475
Name:  ? AT1G24380 Secondary Identifier:  ? PAC:19649954
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-6842 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G24380 0.5kb upstream 0.5kb upstream 2054 true Chr1: 8645556-8647609 Arabidopsis thaliana
AT1G24380 0.5kb upstream 0.5kb upstream 500 false Chr1: 8645556-8646055 Arabidopsis thaliana
AT1G24380 0.5kb downstream 0.5kb downstream 2054 true Chr1: 8646056-8648109 Arabidopsis thaliana
AT1G24380 0.5kb downstream 0.5kb downstream 500 false Chr1: 8647610-8648109 Arabidopsis thaliana
AT1G24380 1.0kb upstream 1.0kb upstream 2554 true Chr1: 8645056-8647609 Arabidopsis thaliana
AT1G24380 1.0kb upstream 1.0kb upstream 1000 false Chr1: 8645056-8646055 Arabidopsis thaliana
AT1G24380 1.0kb downstream 1.0kb downstream 2554 true Chr1: 8646056-8648609 Arabidopsis thaliana
AT1G24380 1.0kb downstream 1.0kb downstream 1000 false Chr1: 8647610-8648609 Arabidopsis thaliana
AT1G24380 2.0kb upstream 2.0kb upstream 3554 true Chr1: 8644056-8647609 Arabidopsis thaliana
AT1G24380 2.0kb upstream 2.0kb upstream 2000 false Chr1: 8644056-8646055 Arabidopsis thaliana
AT1G24380 2.0kb downstream 2.0kb downstream 3554 true Chr1: 8646056-8649609 Arabidopsis thaliana
AT1G24380 2.0kb downstream 2.0kb downstream 2000 false Chr1: 8647610-8649609 Arabidopsis thaliana
AT1G24380 5.0kb upstream 5.0kb upstream 6554 true Chr1: 8641056-8647609 Arabidopsis thaliana
AT1G24380 5.0kb upstream 5.0kb upstream 5000 false Chr1: 8641056-8646055 Arabidopsis thaliana
AT1G24380 5.0kb downstream 5.0kb downstream 6554 true Chr1: 8646056-8652609 Arabidopsis thaliana
AT1G24380 5.0kb downstream 5.0kb downstream 5000 false Chr1: 8647610-8652609 Arabidopsis thaliana
AT1G24380 10.0kb upstream 10.0kb upstream 11554 true Chr1: 8636056-8647609 Arabidopsis thaliana
AT1G24380 10.0kb upstream 10.0kb upstream 10000 false Chr1: 8636056-8646055 Arabidopsis thaliana
AT1G24380 10.0kb downstream 10.0kb downstream 11554 true Chr1: 8646056-8657609 Arabidopsis thaliana
AT1G24380 10.0kb downstream 10.0kb downstream 10000 false Chr1: 8647610-8657609 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029867 5273 Angiosperm View MSA
122344345 5261 Brassicaceae View MSA
123784368 5264 Brassicales-Malvales View MSA
124349693 5266 SBM View MSA
124181028 5268 Malvidae View MSA
124039955 5270 Rosid View MSA
123752464 5271 Pentapetalae View MSA
122797800 5272 Eudicot View MSA
121351541 5274 Embryophyte View MSA
123382215 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.009     Low  
cufflinks 0.059     Low High
cufflinks 0.011     Low  
cufflinks 0.01     Low  
cufflinks 0.021     Low  
cufflinks 0.071     Low High

0 Strain