Gene : LHT2 A. thaliana TAIR10
Primary Identifier:  ? AT1G24400 Defline:  (1 of 6) PTHR22950:SF235 - LYSINE HISTIDINE TRANSPORTER 1-RELATED
Genomic Order:  2478 Name:  ? AT1G24400
Secondary Identifier:  ? PAC:19657172
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0 Pathways

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G24400 0.5kb upstream 0.5kb upstream 2922 true Chr1: 8651407-8654328 Arabidopsis thaliana
AT1G24400 0.5kb upstream 0.5kb upstream 500 false Chr1: 8653829-8654328 Arabidopsis thaliana
AT1G24400 0.5kb downstream 0.5kb downstream 2922 true Chr1: 8650907-8653828 Arabidopsis thaliana
AT1G24400 0.5kb downstream 0.5kb downstream 500 false Chr1: 8650907-8651406 Arabidopsis thaliana
AT1G24400 1.0kb upstream 1.0kb upstream 3422 true Chr1: 8651407-8654828 Arabidopsis thaliana
AT1G24400 1.0kb upstream 1.0kb upstream 1000 false Chr1: 8653829-8654828 Arabidopsis thaliana
AT1G24400 1.0kb downstream 1.0kb downstream 3422 true Chr1: 8650407-8653828 Arabidopsis thaliana
AT1G24400 1.0kb downstream 1.0kb downstream 1000 false Chr1: 8650407-8651406 Arabidopsis thaliana
AT1G24400 2.0kb upstream 2.0kb upstream 4422 true Chr1: 8651407-8655828 Arabidopsis thaliana
AT1G24400 2.0kb upstream 2.0kb upstream 2000 false Chr1: 8653829-8655828 Arabidopsis thaliana
AT1G24400 2.0kb downstream 2.0kb downstream 4422 true Chr1: 8649407-8653828 Arabidopsis thaliana
AT1G24400 2.0kb downstream 2.0kb downstream 2000 false Chr1: 8649407-8651406 Arabidopsis thaliana
AT1G24400 5.0kb upstream 5.0kb upstream 7422 true Chr1: 8651407-8658828 Arabidopsis thaliana
AT1G24400 5.0kb upstream 5.0kb upstream 5000 false Chr1: 8653829-8658828 Arabidopsis thaliana
AT1G24400 5.0kb downstream 5.0kb downstream 7422 true Chr1: 8646407-8653828 Arabidopsis thaliana
AT1G24400 5.0kb downstream 5.0kb downstream 5000 false Chr1: 8646407-8651406 Arabidopsis thaliana
AT1G24400 10.0kb upstream 10.0kb upstream 12422 true Chr1: 8651407-8663828 Arabidopsis thaliana
AT1G24400 10.0kb upstream 10.0kb upstream 10000 false Chr1: 8653829-8663828 Arabidopsis thaliana
AT1G24400 10.0kb downstream 10.0kb downstream 12422 true Chr1: 8641407-8653828 Arabidopsis thaliana
AT1G24400 10.0kb downstream 10.0kb downstream 10000 false Chr1: 8641407-8651406 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380208 5261 Brassicaceae View MSA
123838432 5264 Brassicales-Malvales View MSA
124344131 5266 SBM View MSA
124252651 5268 Malvidae View MSA
124073927 5270 Rosid View MSA
123750128 5271 Pentapetalae View MSA
122791179 5272 Eudicot View MSA
122045993 5273 Angiosperm View MSA
121346963 5274 Embryophyte View MSA
123428146 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.648        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.604        
cufflinks 0.013     Low Low
cufflinks 2.423        
cufflinks 0.026     Low  

0 Strain