Gene : AT1G24140 A. thaliana TAIR10
Defline:  (1 of 3) 3.4.24.22 - Stromelysin 2 / Transin 2 Genomic Order:  2445
Name:  ? AT1G24140 Secondary Identifier:  ? PAC:19654753
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G24140 0.5kb upstream 0.5kb upstream 1843 true Chr1: 8536045-8537887 Arabidopsis thaliana
AT1G24140 0.5kb upstream 0.5kb upstream 500 false Chr1: 8537388-8537887 Arabidopsis thaliana
AT1G24140 0.5kb downstream 0.5kb downstream 1843 true Chr1: 8535545-8537387 Arabidopsis thaliana
AT1G24140 0.5kb downstream 0.5kb downstream 500 false Chr1: 8535545-8536044 Arabidopsis thaliana
AT1G24140 1.0kb upstream 1.0kb upstream 2343 true Chr1: 8536045-8538387 Arabidopsis thaliana
AT1G24140 1.0kb upstream 1.0kb upstream 1000 false Chr1: 8537388-8538387 Arabidopsis thaliana
AT1G24140 1.0kb downstream 1.0kb downstream 2343 true Chr1: 8535045-8537387 Arabidopsis thaliana
AT1G24140 1.0kb downstream 1.0kb downstream 1000 false Chr1: 8535045-8536044 Arabidopsis thaliana
AT1G24140 2.0kb upstream 2.0kb upstream 3343 true Chr1: 8536045-8539387 Arabidopsis thaliana
AT1G24140 2.0kb upstream 2.0kb upstream 2000 false Chr1: 8537388-8539387 Arabidopsis thaliana
AT1G24140 2.0kb downstream 2.0kb downstream 3343 true Chr1: 8534045-8537387 Arabidopsis thaliana
AT1G24140 2.0kb downstream 2.0kb downstream 2000 false Chr1: 8534045-8536044 Arabidopsis thaliana
AT1G24140 5.0kb upstream 5.0kb upstream 6343 true Chr1: 8536045-8542387 Arabidopsis thaliana
AT1G24140 5.0kb upstream 5.0kb upstream 5000 false Chr1: 8537388-8542387 Arabidopsis thaliana
AT1G24140 5.0kb downstream 5.0kb downstream 6343 true Chr1: 8531045-8537387 Arabidopsis thaliana
AT1G24140 5.0kb downstream 5.0kb downstream 5000 false Chr1: 8531045-8536044 Arabidopsis thaliana
AT1G24140 10.0kb upstream 10.0kb upstream 11343 true Chr1: 8536045-8547387 Arabidopsis thaliana
AT1G24140 10.0kb upstream 10.0kb upstream 10000 false Chr1: 8537388-8547387 Arabidopsis thaliana
AT1G24140 10.0kb downstream 10.0kb downstream 11343 true Chr1: 8526045-8537387 Arabidopsis thaliana
AT1G24140 10.0kb downstream 10.0kb downstream 10000 false Chr1: 8526045-8536044 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041440 5273 Angiosperm View MSA
122370339 5261 Brassicaceae View MSA
123835470 5264 Brassicales-Malvales View MSA
124350845 5266 SBM View MSA
124249735 5268 Malvidae View MSA
124061806 5270 Rosid View MSA
123745217 5271 Pentapetalae View MSA
122786222 5272 Eudicot View MSA
121350353 5274 Embryophyte View MSA
123381692 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.863       High
cufflinks 2.474       Low
cufflinks 12.171        
cufflinks 4.976        
cufflinks 11.983        
cufflinks 1.995       Low

0 Strain