Gene : AT1G23780 A. thaliana TAIR10
Defline:  (1 of 1) PTHR15537:SF2 - F-BOX ONLY PROTEIN 7 Genomic Order:  2409
Name:  ? AT1G23780 Secondary Identifier:  ? PAC:19657063
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G23780 0.5kb upstream 0.5kb upstream 2340 true Chr1: 8406686-8409025 Arabidopsis thaliana
AT1G23780 0.5kb upstream 0.5kb upstream 500 false Chr1: 8408526-8409025 Arabidopsis thaliana
AT1G23780 0.5kb downstream 0.5kb downstream 2340 true Chr1: 8406186-8408525 Arabidopsis thaliana
AT1G23780 0.5kb downstream 0.5kb downstream 500 false Chr1: 8406186-8406685 Arabidopsis thaliana
AT1G23780 1.0kb upstream 1.0kb upstream 2840 true Chr1: 8406686-8409525 Arabidopsis thaliana
AT1G23780 1.0kb upstream 1.0kb upstream 1000 false Chr1: 8408526-8409525 Arabidopsis thaliana
AT1G23780 1.0kb downstream 1.0kb downstream 2840 true Chr1: 8405686-8408525 Arabidopsis thaliana
AT1G23780 1.0kb downstream 1.0kb downstream 1000 false Chr1: 8405686-8406685 Arabidopsis thaliana
AT1G23780 2.0kb upstream 2.0kb upstream 3840 true Chr1: 8406686-8410525 Arabidopsis thaliana
AT1G23780 2.0kb upstream 2.0kb upstream 2000 false Chr1: 8408526-8410525 Arabidopsis thaliana
AT1G23780 2.0kb downstream 2.0kb downstream 3840 true Chr1: 8404686-8408525 Arabidopsis thaliana
AT1G23780 2.0kb downstream 2.0kb downstream 2000 false Chr1: 8404686-8406685 Arabidopsis thaliana
AT1G23780 5.0kb upstream 5.0kb upstream 6840 true Chr1: 8406686-8413525 Arabidopsis thaliana
AT1G23780 5.0kb upstream 5.0kb upstream 5000 false Chr1: 8408526-8413525 Arabidopsis thaliana
AT1G23780 5.0kb downstream 5.0kb downstream 6840 true Chr1: 8401686-8408525 Arabidopsis thaliana
AT1G23780 5.0kb downstream 5.0kb downstream 5000 false Chr1: 8401686-8406685 Arabidopsis thaliana
AT1G23780 10.0kb upstream 10.0kb upstream 11840 true Chr1: 8406686-8418525 Arabidopsis thaliana
AT1G23780 10.0kb upstream 10.0kb upstream 10000 false Chr1: 8408526-8418525 Arabidopsis thaliana
AT1G23780 10.0kb downstream 10.0kb downstream 11840 true Chr1: 8396686-8408525 Arabidopsis thaliana
AT1G23780 10.0kb downstream 10.0kb downstream 10000 false Chr1: 8396686-8406685 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370594 5261 Brassicaceae View MSA
123832164 5264 Brassicales-Malvales View MSA
124345668 5266 SBM View MSA
124240895 5268 Malvidae View MSA
124063152 5270 Rosid View MSA
123750980 5271 Pentapetalae View MSA
122788035 5272 Eudicot View MSA
122047475 5273 Angiosperm View MSA
121345803 5274 Embryophyte View MSA
123425228 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.518        
cufflinks 15.216       Low
cufflinks 16.25        
cufflinks 18.25       High
cufflinks 17.343        
cufflinks 15.248       Low

0 Strain