Gene : AT1G22690 A. thaliana TAIR10
Defline:  (1 of 1) PTHR23201//PTHR23201:SF20 - EXTENSIN, PROLINE-RICH PROTEIN // GIBBERELLIN-REGULATED PROTEIN 14-RELATED Genomic Order:  2293
Name:  ? AT1G22690 Secondary Identifier:  ? PAC:19657952
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G22690 0.5kb upstream 0.5kb upstream 1375 true Chr1: 8026794-8028168 Arabidopsis thaliana
AT1G22690 0.5kb upstream 0.5kb upstream 500 false Chr1: 8026794-8027293 Arabidopsis thaliana
AT1G22690 0.5kb downstream 0.5kb downstream 1375 true Chr1: 8027294-8028668 Arabidopsis thaliana
AT1G22690 0.5kb downstream 0.5kb downstream 500 false Chr1: 8028169-8028668 Arabidopsis thaliana
AT1G22690 1.0kb upstream 1.0kb upstream 1875 true Chr1: 8026294-8028168 Arabidopsis thaliana
AT1G22690 1.0kb upstream 1.0kb upstream 1000 false Chr1: 8026294-8027293 Arabidopsis thaliana
AT1G22690 1.0kb downstream 1.0kb downstream 1875 true Chr1: 8027294-8029168 Arabidopsis thaliana
AT1G22690 1.0kb downstream 1.0kb downstream 1000 false Chr1: 8028169-8029168 Arabidopsis thaliana
AT1G22690 2.0kb upstream 2.0kb upstream 2875 true Chr1: 8025294-8028168 Arabidopsis thaliana
AT1G22690 2.0kb upstream 2.0kb upstream 2000 false Chr1: 8025294-8027293 Arabidopsis thaliana
AT1G22690 2.0kb downstream 2.0kb downstream 2875 true Chr1: 8027294-8030168 Arabidopsis thaliana
AT1G22690 2.0kb downstream 2.0kb downstream 2000 false Chr1: 8028169-8030168 Arabidopsis thaliana
AT1G22690 5.0kb upstream 5.0kb upstream 5875 true Chr1: 8022294-8028168 Arabidopsis thaliana
AT1G22690 5.0kb upstream 5.0kb upstream 5000 false Chr1: 8022294-8027293 Arabidopsis thaliana
AT1G22690 5.0kb downstream 5.0kb downstream 5875 true Chr1: 8027294-8033168 Arabidopsis thaliana
AT1G22690 5.0kb downstream 5.0kb downstream 5000 false Chr1: 8028169-8033168 Arabidopsis thaliana
AT1G22690 10.0kb upstream 10.0kb upstream 10875 true Chr1: 8017294-8028168 Arabidopsis thaliana
AT1G22690 10.0kb upstream 10.0kb upstream 10000 false Chr1: 8017294-8027293 Arabidopsis thaliana
AT1G22690 10.0kb downstream 10.0kb downstream 10875 true Chr1: 8027294-8038168 Arabidopsis thaliana
AT1G22690 10.0kb downstream 10.0kb downstream 10000 false Chr1: 8028169-8038168 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372380 5261 Brassicaceae View MSA
123800348 5264 Brassicales-Malvales View MSA
124342858 5266 SBM View MSA
124238368 5268 Malvidae View MSA
124062326 5270 Rosid View MSA
123742542 5271 Pentapetalae View MSA
122770309 5272 Eudicot View MSA
122051034 5273 Angiosperm View MSA
121312257 5274 Embryophyte View MSA
123349447 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.78        
cufflinks 0.035     Low  
cufflinks 6.651       High
cufflinks 0.006     Low Low
cufflinks 3.893        
cufflinks 0.056     Low  

0 Strain