Gene : AT1G22570 A. thaliana TAIR10
Defline:  (1 of 7) PTHR11654//PTHR11654:SF94 - OLIGOPEPTIDE TRANSPORTER-RELATED // PROTEIN NRT1/ PTR FAMILY 5.10-RELATED Genomic Order:  2281
Name:  ? AT1G22570 Secondary Identifier:  ? PAC:19656053
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G22570 0.5kb upstream 0.5kb upstream 2454 true Chr1: 7976620-7979073 Arabidopsis thaliana
AT1G22570 0.5kb upstream 0.5kb upstream 500 false Chr1: 7978574-7979073 Arabidopsis thaliana
AT1G22570 0.5kb downstream 0.5kb downstream 2454 true Chr1: 7976120-7978573 Arabidopsis thaliana
AT1G22570 0.5kb downstream 0.5kb downstream 500 false Chr1: 7976120-7976619 Arabidopsis thaliana
AT1G22570 1.0kb upstream 1.0kb upstream 2954 true Chr1: 7976620-7979573 Arabidopsis thaliana
AT1G22570 1.0kb upstream 1.0kb upstream 1000 false Chr1: 7978574-7979573 Arabidopsis thaliana
AT1G22570 1.0kb downstream 1.0kb downstream 2954 true Chr1: 7975620-7978573 Arabidopsis thaliana
AT1G22570 1.0kb downstream 1.0kb downstream 1000 false Chr1: 7975620-7976619 Arabidopsis thaliana
AT1G22570 2.0kb upstream 2.0kb upstream 3954 true Chr1: 7976620-7980573 Arabidopsis thaliana
AT1G22570 2.0kb upstream 2.0kb upstream 2000 false Chr1: 7978574-7980573 Arabidopsis thaliana
AT1G22570 2.0kb downstream 2.0kb downstream 3954 true Chr1: 7974620-7978573 Arabidopsis thaliana
AT1G22570 2.0kb downstream 2.0kb downstream 2000 false Chr1: 7974620-7976619 Arabidopsis thaliana
AT1G22570 5.0kb upstream 5.0kb upstream 6954 true Chr1: 7976620-7983573 Arabidopsis thaliana
AT1G22570 5.0kb upstream 5.0kb upstream 5000 false Chr1: 7978574-7983573 Arabidopsis thaliana
AT1G22570 5.0kb downstream 5.0kb downstream 6954 true Chr1: 7971620-7978573 Arabidopsis thaliana
AT1G22570 5.0kb downstream 5.0kb downstream 5000 false Chr1: 7971620-7976619 Arabidopsis thaliana
AT1G22570 10.0kb upstream 10.0kb upstream 11954 true Chr1: 7976620-7988573 Arabidopsis thaliana
AT1G22570 10.0kb upstream 10.0kb upstream 10000 false Chr1: 7978574-7988573 Arabidopsis thaliana
AT1G22570 10.0kb downstream 10.0kb downstream 11954 true Chr1: 7966620-7978573 Arabidopsis thaliana
AT1G22570 10.0kb downstream 10.0kb downstream 10000 false Chr1: 7966620-7976619 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366046 5261 Brassicaceae View MSA
123799095 5264 Brassicales-Malvales View MSA
124296650 5266 SBM View MSA
124148741 5268 Malvidae View MSA
123874679 5270 Rosid View MSA
123752034 5271 Pentapetalae View MSA
122791264 5272 Eudicot View MSA
122045337 5273 Angiosperm View MSA
121350655 5274 Embryophyte View MSA
123428779 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.894        
cufflinks 4.683        
cufflinks 14.023        
cufflinks 3.789       Low
cufflinks 22.7       High
cufflinks 5.0        

0 Strain