Gene : AT1G22170 A. thaliana TAIR10
Defline:  (1 of 2) K01834 - 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (PGAM, gpmA) Genomic Order:  2244
Name:  ? AT1G22170 Secondary Identifier:  ? PAC:19651998
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana ANAEROFRUCAT-PWY Arabidopsis thaliana pathologic  
Athaliana ANAGLYCOLYSIS-PWY Arabidopsis thaliana pathologic  
Athaliana PWY66-399 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G22170 0.5kb upstream 0.5kb upstream 2538 true Chr1: 7825789-7828326 Arabidopsis thaliana
AT1G22170 0.5kb upstream 0.5kb upstream 500 false Chr1: 7825789-7826288 Arabidopsis thaliana
AT1G22170 0.5kb downstream 0.5kb downstream 2538 true Chr1: 7826289-7828826 Arabidopsis thaliana
AT1G22170 0.5kb downstream 0.5kb downstream 500 false Chr1: 7828327-7828826 Arabidopsis thaliana
AT1G22170 1.0kb upstream 1.0kb upstream 3038 true Chr1: 7825289-7828326 Arabidopsis thaliana
AT1G22170 1.0kb upstream 1.0kb upstream 1000 false Chr1: 7825289-7826288 Arabidopsis thaliana
AT1G22170 1.0kb downstream 1.0kb downstream 3038 true Chr1: 7826289-7829326 Arabidopsis thaliana
AT1G22170 1.0kb downstream 1.0kb downstream 1000 false Chr1: 7828327-7829326 Arabidopsis thaliana
AT1G22170 2.0kb upstream 2.0kb upstream 4038 true Chr1: 7824289-7828326 Arabidopsis thaliana
AT1G22170 2.0kb upstream 2.0kb upstream 2000 false Chr1: 7824289-7826288 Arabidopsis thaliana
AT1G22170 2.0kb downstream 2.0kb downstream 4038 true Chr1: 7826289-7830326 Arabidopsis thaliana
AT1G22170 2.0kb downstream 2.0kb downstream 2000 false Chr1: 7828327-7830326 Arabidopsis thaliana
AT1G22170 5.0kb upstream 5.0kb upstream 7038 true Chr1: 7821289-7828326 Arabidopsis thaliana
AT1G22170 5.0kb upstream 5.0kb upstream 5000 false Chr1: 7821289-7826288 Arabidopsis thaliana
AT1G22170 5.0kb downstream 5.0kb downstream 7038 true Chr1: 7826289-7833326 Arabidopsis thaliana
AT1G22170 5.0kb downstream 5.0kb downstream 5000 false Chr1: 7828327-7833326 Arabidopsis thaliana
AT1G22170 10.0kb upstream 10.0kb upstream 12038 true Chr1: 7816289-7828326 Arabidopsis thaliana
AT1G22170 10.0kb upstream 10.0kb upstream 10000 false Chr1: 7816289-7826288 Arabidopsis thaliana
AT1G22170 10.0kb downstream 10.0kb downstream 12038 true Chr1: 7826289-7838326 Arabidopsis thaliana
AT1G22170 10.0kb downstream 10.0kb downstream 10000 false Chr1: 7828327-7838326 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361455 5261 Brassicaceae View MSA
123830000 5264 Brassicales-Malvales View MSA
124350415 5266 SBM View MSA
124251254 5268 Malvidae View MSA
124065528 5270 Rosid View MSA
123752797 5271 Pentapetalae View MSA
122793128 5272 Eudicot View MSA
122042134 5273 Angiosperm View MSA
121349250 5274 Embryophyte View MSA
123428363 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.77        
cufflinks 10.247        
cufflinks 3.758        
cufflinks 10.007        
cufflinks 3.293       Low
cufflinks 12.241       High

0 Strain