Gene : AT1G21830 A. thaliana TAIR10
Defline:  (1 of 7) PF05340 - Protein of unknown function (DUF740) (DUF740) Genomic Order:  2201
Name:  ? AT1G21830 Secondary Identifier:  ? PAC:19653078
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G21830 0.5kb upstream 0.5kb upstream 1991 true Chr1: 7661118-7663108 Arabidopsis thaliana
AT1G21830 0.5kb upstream 0.5kb upstream 500 false Chr1: 7662609-7663108 Arabidopsis thaliana
AT1G21830 0.5kb downstream 0.5kb downstream 1991 true Chr1: 7660618-7662608 Arabidopsis thaliana
AT1G21830 0.5kb downstream 0.5kb downstream 500 false Chr1: 7660618-7661117 Arabidopsis thaliana
AT1G21830 1.0kb upstream 1.0kb upstream 2491 true Chr1: 7661118-7663608 Arabidopsis thaliana
AT1G21830 1.0kb upstream 1.0kb upstream 1000 false Chr1: 7662609-7663608 Arabidopsis thaliana
AT1G21830 1.0kb downstream 1.0kb downstream 2491 true Chr1: 7660118-7662608 Arabidopsis thaliana
AT1G21830 1.0kb downstream 1.0kb downstream 1000 false Chr1: 7660118-7661117 Arabidopsis thaliana
AT1G21830 2.0kb upstream 2.0kb upstream 3491 true Chr1: 7661118-7664608 Arabidopsis thaliana
AT1G21830 2.0kb upstream 2.0kb upstream 2000 false Chr1: 7662609-7664608 Arabidopsis thaliana
AT1G21830 2.0kb downstream 2.0kb downstream 3491 true Chr1: 7659118-7662608 Arabidopsis thaliana
AT1G21830 2.0kb downstream 2.0kb downstream 2000 false Chr1: 7659118-7661117 Arabidopsis thaliana
AT1G21830 5.0kb upstream 5.0kb upstream 6491 true Chr1: 7661118-7667608 Arabidopsis thaliana
AT1G21830 5.0kb upstream 5.0kb upstream 5000 false Chr1: 7662609-7667608 Arabidopsis thaliana
AT1G21830 5.0kb downstream 5.0kb downstream 6491 true Chr1: 7656118-7662608 Arabidopsis thaliana
AT1G21830 5.0kb downstream 5.0kb downstream 5000 false Chr1: 7656118-7661117 Arabidopsis thaliana
AT1G21830 10.0kb upstream 10.0kb upstream 11491 true Chr1: 7661118-7672608 Arabidopsis thaliana
AT1G21830 10.0kb upstream 10.0kb upstream 10000 false Chr1: 7662609-7672608 Arabidopsis thaliana
AT1G21830 10.0kb downstream 10.0kb downstream 11491 true Chr1: 7651118-7662608 Arabidopsis thaliana
AT1G21830 10.0kb downstream 10.0kb downstream 10000 false Chr1: 7651118-7661117 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364609 5261 Brassicaceae View MSA
123841021 5264 Brassicales-Malvales View MSA
124340393 5266 SBM View MSA
124243965 5268 Malvidae View MSA
124067867 5270 Rosid View MSA
123750206 5271 Pentapetalae View MSA
122796157 5272 Eudicot View MSA
122043304 5273 Angiosperm View MSA
121310104 5274 Embryophyte View MSA
123347686 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.825       High
cufflinks 6.793       Low
cufflinks 10.087       High
cufflinks 7.88        
cufflinks 8.319        
cufflinks 6.992        

0 Strain