Gene : EXT3 A. thaliana TAIR10
Primary Identifier:  ? AT1G21310 Defline:  (1 of 16) PF04554 - Extensin-like region (Extensin_2)
Genomic Order:  2145 Name:  ? AT1G21310
Secondary Identifier:  ? PAC:19649109
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G21310 0.5kb upstream 0.5kb upstream 2274 true Chr1: 7453236-7455509 Arabidopsis thaliana
AT1G21310 0.5kb upstream 0.5kb upstream 500 false Chr1: 7455010-7455509 Arabidopsis thaliana
AT1G21310 0.5kb downstream 0.5kb downstream 2274 true Chr1: 7452736-7455009 Arabidopsis thaliana
AT1G21310 0.5kb downstream 0.5kb downstream 500 false Chr1: 7452736-7453235 Arabidopsis thaliana
AT1G21310 1.0kb upstream 1.0kb upstream 2774 true Chr1: 7453236-7456009 Arabidopsis thaliana
AT1G21310 1.0kb upstream 1.0kb upstream 1000 false Chr1: 7455010-7456009 Arabidopsis thaliana
AT1G21310 1.0kb downstream 1.0kb downstream 2774 true Chr1: 7452236-7455009 Arabidopsis thaliana
AT1G21310 1.0kb downstream 1.0kb downstream 1000 false Chr1: 7452236-7453235 Arabidopsis thaliana
AT1G21310 2.0kb upstream 2.0kb upstream 3774 true Chr1: 7453236-7457009 Arabidopsis thaliana
AT1G21310 2.0kb upstream 2.0kb upstream 2000 false Chr1: 7455010-7457009 Arabidopsis thaliana
AT1G21310 2.0kb downstream 2.0kb downstream 3774 true Chr1: 7451236-7455009 Arabidopsis thaliana
AT1G21310 2.0kb downstream 2.0kb downstream 2000 false Chr1: 7451236-7453235 Arabidopsis thaliana
AT1G21310 5.0kb upstream 5.0kb upstream 6774 true Chr1: 7453236-7460009 Arabidopsis thaliana
AT1G21310 5.0kb upstream 5.0kb upstream 5000 false Chr1: 7455010-7460009 Arabidopsis thaliana
AT1G21310 5.0kb downstream 5.0kb downstream 6774 true Chr1: 7448236-7455009 Arabidopsis thaliana
AT1G21310 5.0kb downstream 5.0kb downstream 5000 false Chr1: 7448236-7453235 Arabidopsis thaliana
AT1G21310 10.0kb upstream 10.0kb upstream 11774 true Chr1: 7453236-7465009 Arabidopsis thaliana
AT1G21310 10.0kb upstream 10.0kb upstream 10000 false Chr1: 7455010-7465009 Arabidopsis thaliana
AT1G21310 10.0kb downstream 10.0kb downstream 11774 true Chr1: 7443236-7455009 Arabidopsis thaliana
AT1G21310 10.0kb downstream 10.0kb downstream 10000 false Chr1: 7443236-7453235 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378949 5261 Brassicaceae View MSA
123802047 5264 Brassicales-Malvales View MSA
124299271 5266 SBM View MSA
124252786 5268 Malvidae View MSA
124073518 5270 Rosid View MSA
123753028 5271 Pentapetalae View MSA
122796591 5272 Eudicot View MSA
122051631 5273 Angiosperm View MSA
121349317 5274 Embryophyte View MSA
123381274 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 175.58     High  
cufflinks 154.924     High  
cufflinks 40.526     High Low
cufflinks 220.864     High  
cufflinks 101.61     High  
cufflinks 282.493     High High

0 Strain