Gene : AT1G20823 A. thaliana TAIR10
Defline:  (1 of 2) PTHR14155//PTHR14155:SF187 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Genomic Order:  2098
Name:  ? AT1G20823 Secondary Identifier:  ? PAC:19655648
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G20823 0.5kb upstream 0.5kb upstream 1370 true Chr1: 7238300-7239669 Arabidopsis thaliana
AT1G20823 0.5kb upstream 0.5kb upstream 500 false Chr1: 7238300-7238799 Arabidopsis thaliana
AT1G20823 0.5kb downstream 0.5kb downstream 1370 true Chr1: 7238800-7240169 Arabidopsis thaliana
AT1G20823 0.5kb downstream 0.5kb downstream 500 false Chr1: 7239670-7240169 Arabidopsis thaliana
AT1G20823 1.0kb upstream 1.0kb upstream 1870 true Chr1: 7237800-7239669 Arabidopsis thaliana
AT1G20823 1.0kb upstream 1.0kb upstream 1000 false Chr1: 7237800-7238799 Arabidopsis thaliana
AT1G20823 1.0kb downstream 1.0kb downstream 1870 true Chr1: 7238800-7240669 Arabidopsis thaliana
AT1G20823 1.0kb downstream 1.0kb downstream 1000 false Chr1: 7239670-7240669 Arabidopsis thaliana
AT1G20823 2.0kb upstream 2.0kb upstream 2870 true Chr1: 7236800-7239669 Arabidopsis thaliana
AT1G20823 2.0kb upstream 2.0kb upstream 2000 false Chr1: 7236800-7238799 Arabidopsis thaliana
AT1G20823 2.0kb downstream 2.0kb downstream 2870 true Chr1: 7238800-7241669 Arabidopsis thaliana
AT1G20823 2.0kb downstream 2.0kb downstream 2000 false Chr1: 7239670-7241669 Arabidopsis thaliana
AT1G20823 5.0kb upstream 5.0kb upstream 5870 true Chr1: 7233800-7239669 Arabidopsis thaliana
AT1G20823 5.0kb upstream 5.0kb upstream 5000 false Chr1: 7233800-7238799 Arabidopsis thaliana
AT1G20823 5.0kb downstream 5.0kb downstream 5870 true Chr1: 7238800-7244669 Arabidopsis thaliana
AT1G20823 5.0kb downstream 5.0kb downstream 5000 false Chr1: 7239670-7244669 Arabidopsis thaliana
AT1G20823 10.0kb upstream 10.0kb upstream 10870 true Chr1: 7228800-7239669 Arabidopsis thaliana
AT1G20823 10.0kb upstream 10.0kb upstream 10000 false Chr1: 7228800-7238799 Arabidopsis thaliana
AT1G20823 10.0kb downstream 10.0kb downstream 10870 true Chr1: 7238800-7249669 Arabidopsis thaliana
AT1G20823 10.0kb downstream 10.0kb downstream 10000 false Chr1: 7239670-7249669 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374938 5261 Brassicaceae View MSA
123836677 5264 Brassicales-Malvales View MSA
124350349 5266 SBM View MSA
124247066 5268 Malvidae View MSA
124070863 5270 Rosid View MSA
123753111 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.701        
cufflinks 143.476     High  
cufflinks 10.041        
cufflinks 134.323     High  
cufflinks 3.098       Low
cufflinks 136.462     High  

0 Strain