Gene : AT1G21790 A. thaliana TAIR10
Defline:  (1 of 1) PTHR13439:SF4 - PROTEIN K12H6.6, ISOFORM B-RELATED Genomic Order:  2199
Name:  ? AT1G21790 Secondary Identifier:  ? PAC:19656048
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G21790 0.5kb upstream 0.5kb upstream 2200 true Chr1: 7653684-7655883 Arabidopsis thaliana
AT1G21790 0.5kb upstream 0.5kb upstream 500 false Chr1: 7653684-7654183 Arabidopsis thaliana
AT1G21790 0.5kb downstream 0.5kb downstream 2200 true Chr1: 7654184-7656383 Arabidopsis thaliana
AT1G21790 0.5kb downstream 0.5kb downstream 500 false Chr1: 7655884-7656383 Arabidopsis thaliana
AT1G21790 1.0kb upstream 1.0kb upstream 2700 true Chr1: 7653184-7655883 Arabidopsis thaliana
AT1G21790 1.0kb upstream 1.0kb upstream 1000 false Chr1: 7653184-7654183 Arabidopsis thaliana
AT1G21790 1.0kb downstream 1.0kb downstream 2700 true Chr1: 7654184-7656883 Arabidopsis thaliana
AT1G21790 1.0kb downstream 1.0kb downstream 1000 false Chr1: 7655884-7656883 Arabidopsis thaliana
AT1G21790 2.0kb upstream 2.0kb upstream 3700 true Chr1: 7652184-7655883 Arabidopsis thaliana
AT1G21790 2.0kb upstream 2.0kb upstream 2000 false Chr1: 7652184-7654183 Arabidopsis thaliana
AT1G21790 2.0kb downstream 2.0kb downstream 3700 true Chr1: 7654184-7657883 Arabidopsis thaliana
AT1G21790 2.0kb downstream 2.0kb downstream 2000 false Chr1: 7655884-7657883 Arabidopsis thaliana
AT1G21790 5.0kb upstream 5.0kb upstream 6700 true Chr1: 7649184-7655883 Arabidopsis thaliana
AT1G21790 5.0kb upstream 5.0kb upstream 5000 false Chr1: 7649184-7654183 Arabidopsis thaliana
AT1G21790 5.0kb downstream 5.0kb downstream 6700 true Chr1: 7654184-7660883 Arabidopsis thaliana
AT1G21790 5.0kb downstream 5.0kb downstream 5000 false Chr1: 7655884-7660883 Arabidopsis thaliana
AT1G21790 10.0kb upstream 10.0kb upstream 11700 true Chr1: 7644184-7655883 Arabidopsis thaliana
AT1G21790 10.0kb upstream 10.0kb upstream 10000 false Chr1: 7644184-7654183 Arabidopsis thaliana
AT1G21790 10.0kb downstream 10.0kb downstream 11700 true Chr1: 7654184-7665883 Arabidopsis thaliana
AT1G21790 10.0kb downstream 10.0kb downstream 10000 false Chr1: 7655884-7665883 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363690 5261 Brassicaceae View MSA
123832729 5264 Brassicales-Malvales View MSA
124343985 5266 SBM View MSA
124241057 5268 Malvidae View MSA
124060547 5270 Rosid View MSA
123746967 5271 Pentapetalae View MSA
122786195 5272 Eudicot View MSA
122046296 5273 Angiosperm View MSA
121344008 5274 Embryophyte View MSA
123379957 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.399        
cufflinks 7.197       Low
cufflinks 8.4        
cufflinks 8.275        
cufflinks 9.725       High
cufflinks 7.494        

0 Strain