Gene : AT1G20530 A. thaliana TAIR10
Defline:  (1 of 1) PTHR21450:SF19 - F5M15.15 Genomic Order:  2064
Name:  ? AT1G20530 Secondary Identifier:  ? PAC:19658297
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G20530 0.5kb upstream 0.5kb upstream 2508 true Chr1: 7108370-7110877 Arabidopsis thaliana
AT1G20530 0.5kb upstream 0.5kb upstream 500 false Chr1: 7110378-7110877 Arabidopsis thaliana
AT1G20530 0.5kb downstream 0.5kb downstream 2508 true Chr1: 7107870-7110377 Arabidopsis thaliana
AT1G20530 0.5kb downstream 0.5kb downstream 500 false Chr1: 7107870-7108369 Arabidopsis thaliana
AT1G20530 1.0kb upstream 1.0kb upstream 3008 true Chr1: 7108370-7111377 Arabidopsis thaliana
AT1G20530 1.0kb upstream 1.0kb upstream 1000 false Chr1: 7110378-7111377 Arabidopsis thaliana
AT1G20530 1.0kb downstream 1.0kb downstream 3008 true Chr1: 7107370-7110377 Arabidopsis thaliana
AT1G20530 1.0kb downstream 1.0kb downstream 1000 false Chr1: 7107370-7108369 Arabidopsis thaliana
AT1G20530 2.0kb upstream 2.0kb upstream 4008 true Chr1: 7108370-7112377 Arabidopsis thaliana
AT1G20530 2.0kb upstream 2.0kb upstream 2000 false Chr1: 7110378-7112377 Arabidopsis thaliana
AT1G20530 2.0kb downstream 2.0kb downstream 4008 true Chr1: 7106370-7110377 Arabidopsis thaliana
AT1G20530 2.0kb downstream 2.0kb downstream 2000 false Chr1: 7106370-7108369 Arabidopsis thaliana
AT1G20530 5.0kb upstream 5.0kb upstream 7008 true Chr1: 7108370-7115377 Arabidopsis thaliana
AT1G20530 5.0kb upstream 5.0kb upstream 5000 false Chr1: 7110378-7115377 Arabidopsis thaliana
AT1G20530 5.0kb downstream 5.0kb downstream 7008 true Chr1: 7103370-7110377 Arabidopsis thaliana
AT1G20530 5.0kb downstream 5.0kb downstream 5000 false Chr1: 7103370-7108369 Arabidopsis thaliana
AT1G20530 10.0kb upstream 10.0kb upstream 12008 true Chr1: 7108370-7120377 Arabidopsis thaliana
AT1G20530 10.0kb upstream 10.0kb upstream 10000 false Chr1: 7110378-7120377 Arabidopsis thaliana
AT1G20530 10.0kb downstream 10.0kb downstream 12008 true Chr1: 7098370-7110377 Arabidopsis thaliana
AT1G20530 10.0kb downstream 10.0kb downstream 10000 false Chr1: 7098370-7108369 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362623 5261 Brassicaceae View MSA
123836024 5264 Brassicales-Malvales View MSA
124347001 5266 SBM View MSA
124245318 5268 Malvidae View MSA
124072264 5270 Rosid View MSA
123745447 5271 Pentapetalae View MSA
122790852 5272 Eudicot View MSA
122049285 5273 Angiosperm View MSA
121350303 5274 Embryophyte View MSA
123381668 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.503        
cufflinks 0.432        
cufflinks 0.738       High
cufflinks 0.418        
cufflinks 0.416        
cufflinks 0.435        

0 Strain