Gene : ROP2 A. thaliana TAIR10
Primary Identifier:  ? AT1G20090 Defline:  (1 of 3) PTHR24072//PTHR24072:SF171 - RHO FAMILY GTPASE // RAC-LIKE GTP-BINDING PROTEIN ARAC4-RELATED
Genomic Order:  2021 Name:  ? AT1G20090
Secondary Identifier:  ? PAC:19655483
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Genomics

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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G20090 0.5kb upstream 0.5kb upstream 2512 true Chr1: 6966422-6968933 Arabidopsis thaliana
AT1G20090 0.5kb upstream 0.5kb upstream 500 false Chr1: 6966422-6966921 Arabidopsis thaliana
AT1G20090 0.5kb downstream 0.5kb downstream 2512 true Chr1: 6966922-6969433 Arabidopsis thaliana
AT1G20090 0.5kb downstream 0.5kb downstream 500 false Chr1: 6968934-6969433 Arabidopsis thaliana
AT1G20090 1.0kb upstream 1.0kb upstream 3012 true Chr1: 6965922-6968933 Arabidopsis thaliana
AT1G20090 1.0kb upstream 1.0kb upstream 1000 false Chr1: 6965922-6966921 Arabidopsis thaliana
AT1G20090 1.0kb downstream 1.0kb downstream 3012 true Chr1: 6966922-6969933 Arabidopsis thaliana
AT1G20090 1.0kb downstream 1.0kb downstream 1000 false Chr1: 6968934-6969933 Arabidopsis thaliana
AT1G20090 2.0kb upstream 2.0kb upstream 4012 true Chr1: 6964922-6968933 Arabidopsis thaliana
AT1G20090 2.0kb upstream 2.0kb upstream 2000 false Chr1: 6964922-6966921 Arabidopsis thaliana
AT1G20090 2.0kb downstream 2.0kb downstream 4012 true Chr1: 6966922-6970933 Arabidopsis thaliana
AT1G20090 2.0kb downstream 2.0kb downstream 2000 false Chr1: 6968934-6970933 Arabidopsis thaliana
AT1G20090 5.0kb upstream 5.0kb upstream 7012 true Chr1: 6961922-6968933 Arabidopsis thaliana
AT1G20090 5.0kb upstream 5.0kb upstream 5000 false Chr1: 6961922-6966921 Arabidopsis thaliana
AT1G20090 5.0kb downstream 5.0kb downstream 7012 true Chr1: 6966922-6973933 Arabidopsis thaliana
AT1G20090 5.0kb downstream 5.0kb downstream 5000 false Chr1: 6968934-6973933 Arabidopsis thaliana
AT1G20090 10.0kb upstream 10.0kb upstream 12012 true Chr1: 6956922-6968933 Arabidopsis thaliana
AT1G20090 10.0kb upstream 10.0kb upstream 10000 false Chr1: 6956922-6966921 Arabidopsis thaliana
AT1G20090 10.0kb downstream 10.0kb downstream 12012 true Chr1: 6966922-6978933 Arabidopsis thaliana
AT1G20090 10.0kb downstream 10.0kb downstream 10000 false Chr1: 6968934-6978933 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361236 5261 Brassicaceae View MSA
123798122 5264 Brassicales-Malvales View MSA
124295798 5266 SBM View MSA
124250595 5268 Malvidae View MSA
124072956 5270 Rosid View MSA
123751790 5271 Pentapetalae View MSA
122795613 5272 Eudicot View MSA
122049645 5273 Angiosperm View MSA
121348752 5274 Embryophyte View MSA
123426845 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 43.817     High  
cufflinks 35.833     High  
cufflinks 22.414       Low
cufflinks 38.828     High  
cufflinks 24.782       Low
cufflinks 43.906     High  

0 Strain