Gene : AVA-P2 A. thaliana TAIR10
Primary Identifier:  ? AT1G19910 Defline:  (1 of 5) K02155 - V-type H+-transporting ATPase 16kDa proteolipid subunit (ATPeV0C, ATP6L)
Genomic Order:  2003 Name:  ? AT1G19910
Secondary Identifier:  ? PAC:19655555
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G19910 0.5kb upstream 0.5kb upstream 1866 true Chr1: 6912729-6914594 Arabidopsis thaliana
AT1G19910 0.5kb upstream 0.5kb upstream 500 false Chr1: 6912729-6913228 Arabidopsis thaliana
AT1G19910 0.5kb downstream 0.5kb downstream 1866 true Chr1: 6913229-6915094 Arabidopsis thaliana
AT1G19910 0.5kb downstream 0.5kb downstream 500 false Chr1: 6914595-6915094 Arabidopsis thaliana
AT1G19910 1.0kb upstream 1.0kb upstream 2366 true Chr1: 6912229-6914594 Arabidopsis thaliana
AT1G19910 1.0kb upstream 1.0kb upstream 1000 false Chr1: 6912229-6913228 Arabidopsis thaliana
AT1G19910 1.0kb downstream 1.0kb downstream 2366 true Chr1: 6913229-6915594 Arabidopsis thaliana
AT1G19910 1.0kb downstream 1.0kb downstream 1000 false Chr1: 6914595-6915594 Arabidopsis thaliana
AT1G19910 2.0kb upstream 2.0kb upstream 3366 true Chr1: 6911229-6914594 Arabidopsis thaliana
AT1G19910 2.0kb upstream 2.0kb upstream 2000 false Chr1: 6911229-6913228 Arabidopsis thaliana
AT1G19910 2.0kb downstream 2.0kb downstream 3366 true Chr1: 6913229-6916594 Arabidopsis thaliana
AT1G19910 2.0kb downstream 2.0kb downstream 2000 false Chr1: 6914595-6916594 Arabidopsis thaliana
AT1G19910 5.0kb upstream 5.0kb upstream 6366 true Chr1: 6908229-6914594 Arabidopsis thaliana
AT1G19910 5.0kb upstream 5.0kb upstream 5000 false Chr1: 6908229-6913228 Arabidopsis thaliana
AT1G19910 5.0kb downstream 5.0kb downstream 6366 true Chr1: 6913229-6919594 Arabidopsis thaliana
AT1G19910 5.0kb downstream 5.0kb downstream 5000 false Chr1: 6914595-6919594 Arabidopsis thaliana
AT1G19910 10.0kb upstream 10.0kb upstream 11366 true Chr1: 6903229-6914594 Arabidopsis thaliana
AT1G19910 10.0kb upstream 10.0kb upstream 10000 false Chr1: 6903229-6913228 Arabidopsis thaliana
AT1G19910 10.0kb downstream 10.0kb downstream 11366 true Chr1: 6913229-6924594 Arabidopsis thaliana
AT1G19910 10.0kb downstream 10.0kb downstream 10000 false Chr1: 6914595-6924594 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379842 5261 Brassicaceae View MSA
123840555 5264 Brassicales-Malvales View MSA
124343812 5266 SBM View MSA
124250754 5268 Malvidae View MSA
124071141 5270 Rosid View MSA
123751721 5271 Pentapetalae View MSA
122796043 5272 Eudicot View MSA
122048360 5273 Angiosperm View MSA
121348011 5274 Embryophyte View MSA
123424193 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 90.874     High Low
cufflinks 141.998     High High
cufflinks 98.927     High  
cufflinks 137.337     High  
cufflinks 103.439     High  
cufflinks 135.603     High  

0 Strain