Gene : HVA22H A. thaliana TAIR10
Primary Identifier:  ? AT1G19950 Defline:  (1 of 3) PTHR12300//PTHR12300:SF26 - HVA22-LIKE PROTEINS // HVA22-LIKE PROTEIN G-RELATED
Genomic Order:  2007 Name:  ? AT1G19950
Secondary Identifier:  ? PAC:19655714
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G19950 0.5kb upstream 0.5kb upstream 3041 true Chr1: 6923684-6926724 Arabidopsis thaliana
AT1G19950 0.5kb upstream 0.5kb upstream 500 false Chr1: 6923684-6924183 Arabidopsis thaliana
AT1G19950 0.5kb downstream 0.5kb downstream 3041 true Chr1: 6924184-6927224 Arabidopsis thaliana
AT1G19950 0.5kb downstream 0.5kb downstream 500 false Chr1: 6926725-6927224 Arabidopsis thaliana
AT1G19950 1.0kb upstream 1.0kb upstream 3541 true Chr1: 6923184-6926724 Arabidopsis thaliana
AT1G19950 1.0kb upstream 1.0kb upstream 1000 false Chr1: 6923184-6924183 Arabidopsis thaliana
AT1G19950 1.0kb downstream 1.0kb downstream 3541 true Chr1: 6924184-6927724 Arabidopsis thaliana
AT1G19950 1.0kb downstream 1.0kb downstream 1000 false Chr1: 6926725-6927724 Arabidopsis thaliana
AT1G19950 2.0kb upstream 2.0kb upstream 4541 true Chr1: 6922184-6926724 Arabidopsis thaliana
AT1G19950 2.0kb upstream 2.0kb upstream 2000 false Chr1: 6922184-6924183 Arabidopsis thaliana
AT1G19950 2.0kb downstream 2.0kb downstream 4541 true Chr1: 6924184-6928724 Arabidopsis thaliana
AT1G19950 2.0kb downstream 2.0kb downstream 2000 false Chr1: 6926725-6928724 Arabidopsis thaliana
AT1G19950 5.0kb upstream 5.0kb upstream 7541 true Chr1: 6919184-6926724 Arabidopsis thaliana
AT1G19950 5.0kb upstream 5.0kb upstream 5000 false Chr1: 6919184-6924183 Arabidopsis thaliana
AT1G19950 5.0kb downstream 5.0kb downstream 7541 true Chr1: 6924184-6931724 Arabidopsis thaliana
AT1G19950 5.0kb downstream 5.0kb downstream 5000 false Chr1: 6926725-6931724 Arabidopsis thaliana
AT1G19950 10.0kb upstream 10.0kb upstream 12541 true Chr1: 6914184-6926724 Arabidopsis thaliana
AT1G19950 10.0kb upstream 10.0kb upstream 10000 false Chr1: 6914184-6924183 Arabidopsis thaliana
AT1G19950 10.0kb downstream 10.0kb downstream 12541 true Chr1: 6924184-6936724 Arabidopsis thaliana
AT1G19950 10.0kb downstream 10.0kb downstream 10000 false Chr1: 6926725-6936724 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367456 5261 Brassicaceae View MSA
123799356 5264 Brassicales-Malvales View MSA
124296883 5266 SBM View MSA
124148916 5268 Malvidae View MSA
124068207 5270 Rosid View MSA
123753523 5271 Pentapetalae View MSA
122794920 5272 Eudicot View MSA
122050664 5273 Angiosperm View MSA
121348530 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.786        
cufflinks 6.739       High
cufflinks 2.046        
cufflinks 4.738        
cufflinks 1.728       Low
cufflinks 6.849       High

0 Strain